Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 AL133264.1-201ENST00000407157 562 ntBASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 RNU2-21P-201ENST00000410368 188 ntBASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 RPS3AP9-201ENST00000417027 792 ntBASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 RPP40P1-201ENST00000426762 456 ntBASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 USP9YP31-201ENST00000431405 881 ntBASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 YWHAZP8-201ENST00000436935 731 ntBASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 AC108463.1-201ENST00000450258 347 ntBASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 MTCO3P35-201ENST00000485582 781 ntBASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 AC084024.2-201ENST00000503480 791 ntBASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 RNA5SP154-201ENST00000516193 111 ntBASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 AC087808.1-201ENST00000520501 361 ntBASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 IGLV3-26-201ENST00000520756 302 ntBASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 MRPL49P2-201ENST00000521066 465 ntBASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 AP000827.1-201ENST00000527814 258 ntBASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 MTND4P33-201ENST00000556706 766 ntBASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 AP001269.3-201ENST00000588718 329 ntBASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 AC067852.4-201ENST00000590314 478 ntBASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 AL445567.2-201ENST00000618935 498 ntBASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 AL158163.2-201ENST00000619110 700 ntBASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 AC034229.5-201ENST00000624258 185 ntBASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 AP000843.1-201ENST00000624880 701 ntBASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 DCAF13P3-201ENST00000561147 1334 ntBASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 AC068254.2-201ENST00000623938 3577 ntBASIC4.42□□□□□ -1.7
POLR1BQ9H9Y6 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 RNA5SP52-201ENST00000362448 134 ntBASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 RNU6-560P-201ENST00000364007 108 ntBASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 MIR134-201ENST00000385258 73 ntBASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 SDHCP2-201ENST00000398565 501 ntBASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 AL445189.1-201ENST00000405722 338 ntBASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 Z74021.1-201ENST00000423610 407 ntBASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 AC104651.2-201ENST00000447549 528 ntBASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 AL359073.1-201ENST00000448036 403 ntBASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 NDUFA5P7-201ENST00000452914 242 ntBASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 snoU13.7-201ENST00000459220 104 ntBASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 RPL5P24-201ENST00000463742 885 ntBASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 AC090142.1-201ENST00000465776 462 ntBASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 RPL7P19-201ENST00000469948 618 ntBASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 AC011979.1-201ENST00000472300 483 ntBASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 RPL23AP65-201ENST00000475608 468 ntBASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 AC108734.3-201ENST00000481241 1165 ntBASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 AC025164.1-201ENST00000496249 478 ntBASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 AC113430.1-201ENST00000506872 718 ntBASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 AADACP1-206ENST00000561502 1193 ntBASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 AC022022.2-201ENST00000602989 360 ntBASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 AC022509.4-201ENST00000621404 572 ntBASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 FAM157B-203ENST00000639350 358 ntBASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
POLR1BQ9H9Y6 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
POLR1BQ9H9Y6 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms