Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 AC127526.1-201ENST00000417526 366 ntBASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 SYF2P2-201ENST00000417620 583 ntBASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 AL158071.1-201ENST00000430315 461 ntBASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 NDUFB9P3-201ENST00000521269 501 ntBASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 AC026333.2-201ENST00000542164 106 ntBASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 GTF2IP22-201ENST00000554443 182 ntBASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 AC106782.4-201ENST00000568264 210 ntBASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 MIR4716-201ENST00000579628 84 ntBASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 BNIP3P38-201ENST00000601117 544 ntBASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 AC010680.3-201ENST00000604215 520 ntBASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 AC007620.3-201ENST00000608131 497 ntBASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 AC019131.2-201ENST00000609071 870 ntBASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 AC066616.2-201ENST00000559334 1481 ntBASIC4.21□□□□□ -1.74
UPF3BQ9BZI7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 RNU6-673P-201ENST00000365084 104 ntBASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 HMGB3P18-201ENST00000406327 590 ntBASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 AL159169.1-201ENST00000421119 127 ntBASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 MRPS18BP2-201ENST00000434310 759 ntBASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 PPIAP3-201ENST00000450588 505 ntBASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 RPL5P24-201ENST00000463742 885 ntBASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 RPL6P9-201ENST00000466502 859 ntBASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 AC106707.2-201ENST00000484182 374 ntBASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 RNU1-103P-201ENST00000516502 125 ntBASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 RANP9-201ENST00000519957 271 ntBASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 DUXAP6-201ENST00000553858 601 ntBASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 RNVU1-4-201ENST00000612985 164 ntBASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 AC009318.3-201ENST00000616916 503 ntBASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
UPF3BQ9BZI7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 AL139811.1-201ENST00000424779 2299 ntBASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 FRG1CP-201ENST00000358464 769 ntBASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 Y_RNA.500-201ENST00000384466 111 ntBASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 RPL7P31-201ENST00000450192 724 ntBASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 CALM1P2-201ENST00000452941 448 ntBASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 RNU6-1218P-201ENST00000458990 108 ntBASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 AC017015.1-201ENST00000477387 286 ntBASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 CDH12P2-201ENST00000504393 298 ntBASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 AC026784.1-201ENST00000507986 352 ntBASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 AC024224.1-201ENST00000538284 609 ntBASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 AL034351.1-201ENST00000605288 668 ntBASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 U7.8-201ENST00000619968 63 ntBASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
UPF3BQ9BZI7 AC090337.1-201ENST00000579651 2074 ntBASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 MIR30E-201ENST00000362104 92 ntBASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 RNU6-304P-201ENST00000364855 107 ntBASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 MIR184-201ENST00000384962 84 ntBASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 ATP5A1P2-201ENST00000412323 255 ntBASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 AL035423.1-201ENST00000420331 213 ntBASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 AL158156.1-201ENST00000422509 473 ntBASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 OSTCP5-201ENST00000425293 453 ntBASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 HMGB3P21-201ENST00000452483 547 ntBASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 SEPT7P6-201ENST00000469999 1143 ntBASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 RN7SL594P-201ENST00000470590 287 ntBASIC4.18□□□□□ -1.74
UPF3BQ9BZI7 NIPA2P2-201ENST00000496376 1083 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms