Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 CYCSP10-201ENST00000417973 294 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 OR51AB1P-201ENST00000429046 620 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 NANOGP6-201ENST00000429190 847 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 CLUHP1-201ENST00000435012 1190 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 AC009961.2-201ENST00000435771 251 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 RABEPKP1-201ENST00000440529 1026 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 RPS20P32-201ENST00000456044 356 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 AC013356.1-201ENST00000489027 564 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 OR5H5P-201ENST00000503164 928 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 AC098976.1-201ENST00000513014 541 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 AC022483.1-201ENST00000514020 567 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 OR5BC1P-201ENST00000529327 739 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 OR7E18P-201ENST00000592589 702 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 AC104687.2-201ENST00000604442 342 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 SDR42E1P1-201ENST00000611327 477 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 AC072046.2-201ENST00000618366 268 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 AL596245.1-201ENST00000618994 362 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 AC110994.2-201ENST00000635481 492 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 AC068870.1-201ENST00000563737 2455 ntBASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TRIM55Q9BYV6 AC008079.2-201ENST00000623543 20396 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 OR4G2P-201ENST00000328113 903 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 U8.3-201ENST00000363321 132 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 RNVU1-3-201ENST00000364313 161 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 Y_RNA.234-201ENST00000364409 97 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 AC104837.2-201ENST00000427236 424 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 AC126120.1-201ENST00000431082 470 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 MTND3P21-201ENST00000433774 331 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 RPL17P49-201ENST00000443728 411 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 RPL7P52-201ENST00000449200 742 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 AC010733.1-201ENST00000451515 401 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 RPS3AP17-201ENST00000472594 777 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 RN7SL57P-201ENST00000493687 290 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 AC012170.1-201ENST00000495139 359 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 ENPP7P11-201ENST00000505915 627 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 AC006390.1-201ENST00000508068 283 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 MTCO3P44-201ENST00000510977 541 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 AC074255.1-201ENST00000511259 501 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 AC005798.1-201ENST00000513715 387 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 AC006960.3-201ENST00000561845 705 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 AC090615.1-201ENST00000577519 154 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 RN7SL290P-201ENST00000578661 300 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 MIR3682-201ENST00000581338 84 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 VN1R79P-201ENST00000593540 513 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 AL009028.1-201ENST00000604895 802 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 AC104695.2-201ENST00000605056 775 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 WT1-AS_8.1-201ENST00000615200 275 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 U4.5-201ENST00000617137 123 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 PISRT1-201ENST00000626175 531 ntBASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM55Q9BYV6 PDZK1P1-202ENST00000425209 1350 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 AL359893.1-201ENST00000447628 1580 ntBASIC5.55□□□□□ -1.52
TRIM55Q9BYV6 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms