Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 S100A11P1-201ENST00000477525 312 ntBASIC4.98□□□□□ -1.61
SCAPERQ9BY12 AC112184.1-201ENST00000505179 312 ntBASIC4.98□□□□□ -1.61
SCAPERQ9BY12 AC010374.2-201ENST00000512933 535 ntBASIC4.98□□□□□ -1.61
SCAPERQ9BY12 MIR2114-201ENST00000516645 80 ntBASIC4.98□□□□□ -1.61
SCAPERQ9BY12 RPL12P22-201ENST00000519073 490 ntBASIC4.98□□□□□ -1.61
SCAPERQ9BY12 AP002404.1-201ENST00000532005 451 ntBASIC4.98□□□□□ -1.61
SCAPERQ9BY12 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.98□□□□□ -1.61
SCAPERQ9BY12 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.98□□□□□ -1.61
SCAPERQ9BY12 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.98□□□□□ -1.61
SCAPERQ9BY12 MIR3162-201ENST00000581818 82 ntBASIC4.98□□□□□ -1.61
SCAPERQ9BY12 AC015911.5-201ENST00000587076 451 ntBASIC4.98□□□□□ -1.61
SCAPERQ9BY12 CR383658.2-201ENST00000547576 1525 ntBASIC4.98□□□□□ -1.61
SCAPERQ9BY12 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SCAPERQ9BY12 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.98□□□□□ -1.61
SCAPERQ9BY12 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SCAPERQ9BY12 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SCAPERQ9BY12 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SCAPERQ9BY12 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SCAPERQ9BY12 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SCAPERQ9BY12 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SCAPERQ9BY12 SNORA7.4-201ENST00000384249 137 ntBASIC4.97□□□□□ -1.61
SCAPERQ9BY12 SETP5-201ENST00000437270 562 ntBASIC4.97□□□□□ -1.61
SCAPERQ9BY12 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.97□□□□□ -1.61
SCAPERQ9BY12 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.97□□□□□ -1.61
SCAPERQ9BY12 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.97□□□□□ -1.61
SCAPERQ9BY12 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.97□□□□□ -1.61
SCAPERQ9BY12 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.97□□□□□ -1.61
SCAPERQ9BY12 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SCAPERQ9BY12 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.97□□□□□ -1.61
SCAPERQ9BY12 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCAPERQ9BY12 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SCAPERQ9BY12 ZNF90P1-201ENST00000480493 1951 ntBASIC4.97□□□□□ -1.61
SCAPERQ9BY12 NCAPGP1-201ENST00000505112 1814 ntBASIC4.97□□□□□ -1.61
SCAPERQ9BY12 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SCAPERQ9BY12 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCAPERQ9BY12 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCAPERQ9BY12 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCAPERQ9BY12 AL139095.1-201ENST00000404326 391 ntBASIC4.97□□□□□ -1.61
SCAPERQ9BY12 HSPE1P8-201ENST00000406997 288 ntBASIC4.97□□□□□ -1.61
SCAPERQ9BY12 RN7SKP56-201ENST00000410513 331 ntBASIC4.97□□□□□ -1.61
SCAPERQ9BY12 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.97□□□□□ -1.61
SCAPERQ9BY12 AMD1P2-201ENST00000412936 992 ntBASIC4.97□□□□□ -1.61
SCAPERQ9BY12 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.97□□□□□ -1.61
SCAPERQ9BY12 AL513175.1-201ENST00000431492 780 ntBASIC4.97□□□□□ -1.61
SCAPERQ9BY12 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.97□□□□□ -1.61
SCAPERQ9BY12 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.97□□□□□ -1.61
SCAPERQ9BY12 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.97□□□□□ -1.61
SCAPERQ9BY12 MIR2682-201ENST00000580305 110 ntBASIC4.97□□□□□ -1.61
SCAPERQ9BY12 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.97□□□□□ -1.61
SCAPERQ9BY12 AL390838.2-201ENST00000602394 274 ntBASIC4.97□□□□□ -1.61
SCAPERQ9BY12 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCAPERQ9BY12 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SCAPERQ9BY12 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SCAPERQ9BY12 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SCAPERQ9BY12 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.96□□□□□ -1.61
SCAPERQ9BY12 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
SCAPERQ9BY12 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SCAPERQ9BY12 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
SCAPERQ9BY12 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SCAPERQ9BY12 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SCAPERQ9BY12 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
SCAPERQ9BY12 FTLP6-201ENST00000355274 422 ntBASIC4.96□□□□□ -1.62
SCAPERQ9BY12 AL138878.1-201ENST00000405131 347 ntBASIC4.96□□□□□ -1.62
SCAPERQ9BY12 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.96□□□□□ -1.62
SCAPERQ9BY12 RN7SL93P-201ENST00000463035 293 ntBASIC4.96□□□□□ -1.62
SCAPERQ9BY12 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.96□□□□□ -1.62
SCAPERQ9BY12 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.96□□□□□ -1.62
SCAPERQ9BY12 AC026801.2-201ENST00000515352 425 ntBASIC4.96□□□□□ -1.62
SCAPERQ9BY12 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.96□□□□□ -1.62
SCAPERQ9BY12 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SCAPERQ9BY12 AC100793.4-201ENST00000613683 429 ntBASIC4.96□□□□□ -1.62
SCAPERQ9BY12 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.96□□□□□ -1.62
SCAPERQ9BY12 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.96□□□□□ -1.62
SCAPERQ9BY12 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SCAPERQ9BY12 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SCAPERQ9BY12 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
SCAPERQ9BY12 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SCAPERQ9BY12 AC068647.1-201ENST00000489539 2265 ntBASIC4.95□□□□□ -1.62
SCAPERQ9BY12 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.95□□□□□ -1.62
SCAPERQ9BY12 RNA5SP432-201ENST00000362480 116 ntBASIC4.95□□□□□ -1.62
SCAPERQ9BY12 RHEBP3-201ENST00000411920 351 ntBASIC4.95□□□□□ -1.62
SCAPERQ9BY12 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SCAPERQ9BY12 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.95□□□□□ -1.62
SCAPERQ9BY12 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SCAPERQ9BY12 PPIAP17-201ENST00000438507 471 ntBASIC4.95□□□□□ -1.62
SCAPERQ9BY12 DNAJC19P8-201ENST00000452887 259 ntBASIC4.95□□□□□ -1.62
SCAPERQ9BY12 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.95□□□□□ -1.62
SCAPERQ9BY12 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.95□□□□□ -1.62
SCAPERQ9BY12 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.95□□□□□ -1.62
SCAPERQ9BY12 AC022149.2-201ENST00000621061 203 ntBASIC4.95□□□□□ -1.62
SCAPERQ9BY12 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SCAPERQ9BY12 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SCAPERQ9BY12 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.94□□□□□ -1.62
SCAPERQ9BY12 FAM35BP-202ENST00000497389 3337 ntBASIC4.94□□□□□ -1.62
SCAPERQ9BY12 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
SCAPERQ9BY12 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.94□□□□□ -1.62
SCAPERQ9BY12 AC073073.2-201ENST00000609827 2578 ntBASIC4.94□□□□□ -1.62
SCAPERQ9BY12 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.94□□□□□ -1.62
SCAPERQ9BY12 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCAPERQ9BY12 RNA5SP229-201ENST00000410809 99 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms