Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 GNL2P1-201ENST00000451274 2190 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 SNORD3E-201ENST00000362899 217 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 Y_RNA.106-201ENST00000363189 100 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 RNA5SP234-201ENST00000363916 119 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 Y_RNA.222-201ENST00000364264 102 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 RNU6-903P-201ENST00000391270 109 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 AL590762.1-201ENST00000391782 432 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 UBE2V1P14-201ENST00000415815 558 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 AC048351.1-201ENST00000420064 602 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 MTCO3P29-201ENST00000432119 779 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 ANKRD54P1-201ENST00000433115 471 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 UBE2V1P5-201ENST00000440070 405 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 RPL7AP28-201ENST00000464513 571 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 AC034236.1-201ENST00000469891 373 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 CR383656.1-201ENST00000484916 377 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 RPS27P23-201ENST00000487608 251 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 RPL21P129-201ENST00000491732 478 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 AC111193.1-201ENST00000504097 155 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 RNU6-256P-201ENST00000516747 97 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 RN7SKP92-201ENST00000517266 244 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 AC022616.4-201ENST00000522985 181 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 SETP7-201ENST00000552169 453 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 GLUD1P4-201ENST00000590914 418 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 AC006116.3-201ENST00000592968 361 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 AC068790.4-201ENST00000602474 263 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 AC009779.6-201ENST00000603972 165 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 AC092125.1-201ENST00000562568 1995 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 APP-206ENST00000359726 3294 ntTSL 2 BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 AL121835.2-201ENST00000624253 3502 ntBASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
COL25A1Q9BXS0 HSPA8P14-201ENST00000552265 1805 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 AC121333.1-201ENST00000567488 2709 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 THAP12P7-201ENST00000520248 2290 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 RNU6-552P-201ENST00000362869 119 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 RNU6-593P-201ENST00000364716 112 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 Y_RNA.485-201ENST00000384395 102 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 Y_RNA.506-201ENST00000384494 102 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 RN7SKP62-201ENST00000384539 329 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 AL360182.1-201ENST00000397433 468 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 PPIAP9-201ENST00000403866 498 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 AL355375.1-201ENST00000405686 392 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 PRELID1P2-201ENST00000407805 396 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 MIR1303-201ENST00000408625 86 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 AL590139.1-201ENST00000416267 400 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 AC092832.1-201ENST00000422934 400 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 AC093716.1-201ENST00000435923 377 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 CRYGGP-201ENST00000443337 145 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 OR13K1P-201ENST00000444577 975 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 IGKV1OR-3-201ENST00000446944 348 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 AL034399.1-201ENST00000451535 380 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 RPL7L1P8-201ENST00000469911 741 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 HMGB1P35-201ENST00000503360 598 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 RNU6-470P-201ENST00000515954 104 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 RNU6-1038P-201ENST00000516516 104 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 SNORD116.3-201ENST00000517176 78 ntBASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC6.22□□□□□ -1.41
COL25A1Q9BXS0 AC138761.3-201ENST00000579993 334 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms