Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 TRAV31-201ENST00000502780 342 ntBASIC3.9□□□□□ -1.79
RPRD1AQ96P16 AC110792.2-201ENST00000510278 224 ntBASIC3.9□□□□□ -1.79
RPRD1AQ96P16 RNA5SP208-201ENST00000516156 78 ntBASIC3.9□□□□□ -1.79
RPRD1AQ96P16 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
RPRD1AQ96P16 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.9□□□□□ -1.79
RPRD1AQ96P16 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.9□□□□□ -1.79
RPRD1AQ96P16 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.9□□□□□ -1.79
RPRD1AQ96P16 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.9□□□□□ -1.79
RPRD1AQ96P16 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.9□□□□□ -1.79
RPRD1AQ96P16 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.9□□□□□ -1.79
RPRD1AQ96P16 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.9□□□□□ -1.79
RPRD1AQ96P16 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.9□□□□□ -1.79
RPRD1AQ96P16 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.9□□□□□ -1.79
RPRD1AQ96P16 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
RPRD1AQ96P16 AC034105.4-201ENST00000568304 277 ntBASIC3.9□□□□□ -1.79
RPRD1AQ96P16 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
RPRD1AQ96P16 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.9□□□□□ -1.79
RPRD1AQ96P16 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.9□□□□□ -1.79
RPRD1AQ96P16 LLPHP1-201ENST00000603571 367 ntBASIC3.9□□□□□ -1.79
RPRD1AQ96P16 AL137849.1-201ENST00000604767 169 ntBASIC3.9□□□□□ -1.79
RPRD1AQ96P16 AC012531.5-201ENST00000611375 151 ntBASIC3.9□□□□□ -1.79
RPRD1AQ96P16 AC245389.2-201ENST00000616023 576 ntBASIC3.9□□□□□ -1.79
RPRD1AQ96P16 AC243756.2-201ENST00000618406 463 ntBASIC3.9□□□□□ -1.79
RPRD1AQ96P16 AC242843.1-201ENST00000618702 573 ntBASIC3.9□□□□□ -1.79
RPRD1AQ96P16 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.9□□□□□ -1.79
RPRD1AQ96P16 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
RPRD1AQ96P16 AC022031.1-201ENST00000585985 2593 ntBASIC3.9□□□□□ -1.79
RPRD1AQ96P16 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.9□□□□□ -1.79
RPRD1AQ96P16 HSPA8P19-201ENST00000505359 1517 ntBASIC3.9□□□□□ -1.79
RPRD1AQ96P16 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RPRD1AQ96P16 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 BDP1P-201ENST00000582658 1990 ntBASIC3.89□□□□□ -1.79
RPRD1AQ96P16 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 RNU6-883P-201ENST00000384597 107 ntBASIC3.89□□□□□ -1.79
RPRD1AQ96P16 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.89□□□□□ -1.79
RPRD1AQ96P16 ARL2BPP3-201ENST00000421226 480 ntBASIC3.89□□□□□ -1.79
RPRD1AQ96P16 AL139247.1-201ENST00000422768 325 ntBASIC3.89□□□□□ -1.79
RPRD1AQ96P16 NPM1P34-201ENST00000428821 893 ntBASIC3.89□□□□□ -1.79
RPRD1AQ96P16 AL035246.1-201ENST00000433554 1255 ntBASIC3.89□□□□□ -1.79
RPRD1AQ96P16 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 YWHAQP9-201ENST00000445891 512 ntBASIC3.89□□□□□ -1.79
RPRD1AQ96P16 AL500522.2-201ENST00000448562 343 ntBASIC3.89□□□□□ -1.79
RPRD1AQ96P16 PPIAP3-201ENST00000450588 505 ntBASIC3.89□□□□□ -1.79
RPRD1AQ96P16 AL133162.1-201ENST00000463228 453 ntBASIC3.89□□□□□ -1.79
RPRD1AQ96P16 AC069499.1-201ENST00000489433 509 ntBASIC3.89□□□□□ -1.79
RPRD1AQ96P16 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.89□□□□□ -1.79
RPRD1AQ96P16 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 AC090071.1-201ENST00000507713 644 ntBASIC3.89□□□□□ -1.79
RPRD1AQ96P16 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 AC008802.1-201ENST00000519121 791 ntBASIC3.89□□□□□ -1.79
RPRD1AQ96P16 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 AC006270.2-201ENST00000578523 652 ntBASIC3.89□□□□□ -1.79
RPRD1AQ96P16 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 AC112230.1-201ENST00000604342 547 ntBASIC3.89□□□□□ -1.79
RPRD1AQ96P16 AC113194.1-201ENST00000606037 500 ntBASIC3.89□□□□□ -1.79
RPRD1AQ96P16 SNORA62.6-201ENST00000606322 83 ntBASIC3.89□□□□□ -1.79
RPRD1AQ96P16 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 AL356490.1-201ENST00000623079 479 ntBASIC3.89□□□□□ -1.79
RPRD1AQ96P16 AC138649.5-201ENST00000637456 137 ntBASIC3.89□□□□□ -1.79
RPRD1AQ96P16 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.89□□□□□ -1.79
RPRD1AQ96P16 AL049737.1-201ENST00000413920 1403 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RPRD1AQ96P16 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.88□□□□□ -1.79
RPRD1AQ96P16 RAD1P1-201ENST00000231383 813 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 RNU1-89P-201ENST00000384592 164 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 U8.11-201ENST00000384699 133 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 U8.12-201ENST00000384701 133 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 NPM1P10-201ENST00000398310 865 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 HLFP1-201ENST00000402375 499 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 MIR1303-201ENST00000408625 86 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 RNU2-17P-201ENST00000410290 190 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 AC004987.3-201ENST00000413879 771 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 VTA1P1-201ENST00000414044 866 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.88□□□□□ -1.79
RPRD1AQ96P16 OR5AW1P-201ENST00000426334 1006 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.88□□□□□ -1.79
RPRD1AQ96P16 AC023347.2-201ENST00000433994 462 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RPRD1AQ96P16 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.88□□□□□ -1.79
RPRD1AQ96P16 NOTCH2P1-201ENST00000443481 624 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RPRD1AQ96P16 AC069540.1-201ENST00000446320 988 ntBASIC3.88□□□□□ -1.79
RPRD1AQ96P16 MTND2P25-201ENST00000449028 610 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms