Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 UBE2NP1-201ENST00000545592 458 ntBASIC4.65□□□□□ -1.66
USP47Q96K76 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.65□□□□□ -1.66
USP47Q96K76 SNORD39.2-201ENST00000579995 76 ntBASIC4.65□□□□□ -1.66
USP47Q96K76 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.65□□□□□ -1.66
USP47Q96K76 CKS1BP3-201ENST00000600888 237 ntBASIC4.65□□□□□ -1.66
USP47Q96K76 AC011816.2-201ENST00000607089 556 ntBASIC4.65□□□□□ -1.66
USP47Q96K76 MIR6852-201ENST00000621699 66 ntBASIC4.65□□□□□ -1.66
USP47Q96K76 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
USP47Q96K76 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.65□□□□□ -1.67
USP47Q96K76 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
USP47Q96K76 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.65□□□□□ -1.67
USP47Q96K76 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
USP47Q96K76 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
USP47Q96K76 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.65□□□□□ -1.67
USP47Q96K76 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.65□□□□□ -1.67
USP47Q96K76 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.65□□□□□ -1.67
USP47Q96K76 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
USP47Q96K76 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.65□□□□□ -1.67
USP47Q96K76 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.65□□□□□ -1.67
USP47Q96K76 AL589765.3-201ENST00000446084 462 ntBASIC4.65□□□□□ -1.67
USP47Q96K76 OR6C72P-201ENST00000451403 892 ntBASIC4.65□□□□□ -1.67
USP47Q96K76 RPL12P26-201ENST00000452430 487 ntBASIC4.65□□□□□ -1.67
USP47Q96K76 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.65□□□□□ -1.67
USP47Q96K76 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.65□□□□□ -1.67
USP47Q96K76 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.65□□□□□ -1.67
USP47Q96K76 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.65□□□□□ -1.67
USP47Q96K76 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.65□□□□□ -1.67
USP47Q96K76 AC027807.1-201ENST00000559921 996 ntBASIC4.65□□□□□ -1.67
USP47Q96K76 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.65□□□□□ -1.67
USP47Q96K76 AC009303.3-201ENST00000591103 736 ntBASIC4.65□□□□□ -1.67
USP47Q96K76 uc_338.32-201ENST00000615087 172 ntBASIC4.65□□□□□ -1.67
USP47Q96K76 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.65□□□□□ -1.67
USP47Q96K76 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.64□□□□□ -1.67
USP47Q96K76 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
USP47Q96K76 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.64□□□□□ -1.67
USP47Q96K76 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
USP47Q96K76 Y_RNA.500-201ENST00000384466 111 ntBASIC4.64□□□□□ -1.67
USP47Q96K76 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
USP47Q96K76 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.64□□□□□ -1.67
USP47Q96K76 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.64□□□□□ -1.67
USP47Q96K76 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.64□□□□□ -1.67
USP47Q96K76 AC012065.2-201ENST00000421295 375 ntBASIC4.64□□□□□ -1.67
USP47Q96K76 ETF1P3-201ENST00000430422 1160 ntBASIC4.64□□□□□ -1.67
USP47Q96K76 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.64□□□□□ -1.67
USP47Q96K76 RPL23AP94-201ENST00000512518 302 ntBASIC4.64□□□□□ -1.67
USP47Q96K76 NDUFB9P3-201ENST00000521269 501 ntBASIC4.64□□□□□ -1.67
USP47Q96K76 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.64□□□□□ -1.67
USP47Q96K76 AC011602.1-201ENST00000546484 331 ntBASIC4.64□□□□□ -1.67
USP47Q96K76 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.64□□□□□ -1.67
USP47Q96K76 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.64□□□□□ -1.67
USP47Q96K76 MIR4425-201ENST00000580572 84 ntBASIC4.64□□□□□ -1.67
USP47Q96K76 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.64□□□□□ -1.67
USP47Q96K76 MIR4325-201ENST00000583049 90 ntBASIC4.64□□□□□ -1.67
USP47Q96K76 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.64□□□□□ -1.67
USP47Q96K76 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.63□□□□□ -1.67
USP47Q96K76 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
USP47Q96K76 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
USP47Q96K76 HSPA8P1-201ENST00000425843 1833 ntBASIC4.63□□□□□ -1.67
USP47Q96K76 AL606537.1-201ENST00000607258 2011 ntBASIC4.63□□□□□ -1.67
USP47Q96K76 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
USP47Q96K76 Y_RNA.62-201ENST00000362840 99 ntBASIC4.63□□□□□ -1.67
USP47Q96K76 RN7SKP247-201ENST00000411094 308 ntBASIC4.63□□□□□ -1.67
USP47Q96K76 HMGN1P24-201ENST00000412282 298 ntBASIC4.63□□□□□ -1.67
USP47Q96K76 RANP4-201ENST00000413361 655 ntBASIC4.63□□□□□ -1.67
USP47Q96K76 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.63□□□□□ -1.67
USP47Q96K76 AL121578.1-201ENST00000428051 892 ntBASIC4.63□□□□□ -1.67
USP47Q96K76 BTG3P1-201ENST00000435859 716 ntBASIC4.63□□□□□ -1.67
USP47Q96K76 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.63□□□□□ -1.67
USP47Q96K76 RPL37P3-201ENST00000456825 293 ntBASIC4.63□□□□□ -1.67
USP47Q96K76 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.63□□□□□ -1.67
USP47Q96K76 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.63□□□□□ -1.67
USP47Q96K76 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.63□□□□□ -1.67
USP47Q96K76 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.63□□□□□ -1.67
USP47Q96K76 AL139174.1-201ENST00000531489 886 ntBASIC4.63□□□□□ -1.67
USP47Q96K76 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.63□□□□□ -1.67
USP47Q96K76 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.63□□□□□ -1.67
USP47Q96K76 AL356321.1-201ENST00000621360 228 ntBASIC4.63□□□□□ -1.67
USP47Q96K76 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.63□□□□□ -1.67
USP47Q96K76 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.63□□□□□ -1.67
USP47Q96K76 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.63□□□□□ -1.67
USP47Q96K76 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
USP47Q96K76 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
USP47Q96K76 AF117829.1-206ENST00000621883 3802 ntBASIC4.62□□□□□ -1.67
USP47Q96K76 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.62□□□□□ -1.67
USP47Q96K76 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
USP47Q96K76 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
USP47Q96K76 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
USP47Q96K76 Z98941.1-201ENST00000407764 100 ntBASIC4.62□□□□□ -1.67
USP47Q96K76 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.62□□□□□ -1.67
USP47Q96K76 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.62□□□□□ -1.67
USP47Q96K76 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.62□□□□□ -1.67
USP47Q96K76 AC091862.1-201ENST00000438016 1100 ntBASIC4.62□□□□□ -1.67
USP47Q96K76 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.62□□□□□ -1.67
USP47Q96K76 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.62□□□□□ -1.67
USP47Q96K76 HMGB1P21-201ENST00000502313 581 ntBASIC4.62□□□□□ -1.67
USP47Q96K76 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
USP47Q96K76 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
USP47Q96K76 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.62□□□□□ -1.67
USP47Q96K76 Z82195.1-201ENST00000604558 398 ntBASIC4.62□□□□□ -1.67
USP47Q96K76 AL135786.2-201ENST00000608422 615 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms