Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.29□□□□□ -1.72
SEMA4DQ92854 MTCO3P35-201ENST00000485582 781 ntBASIC4.29□□□□□ -1.72
SEMA4DQ92854 RN7SL271P-201ENST00000487601 295 ntBASIC4.29□□□□□ -1.72
SEMA4DQ92854 RPL7P24-201ENST00000493052 752 ntBASIC4.29□□□□□ -1.72
SEMA4DQ92854 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.29□□□□□ -1.72
SEMA4DQ92854 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.29□□□□□ -1.72
SEMA4DQ92854 Y_RNA.717-201ENST00000517106 92 ntBASIC4.29□□□□□ -1.72
SEMA4DQ92854 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.29□□□□□ -1.72
SEMA4DQ92854 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.29□□□□□ -1.72
SEMA4DQ92854 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.29□□□□□ -1.72
SEMA4DQ92854 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SEMA4DQ92854 GNRHR2P1-201ENST00000555315 631 ntBASIC4.29□□□□□ -1.72
SEMA4DQ92854 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.29□□□□□ -1.72
SEMA4DQ92854 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.29□□□□□ -1.72
SEMA4DQ92854 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SEMA4DQ92854 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.29□□□□□ -1.72
SEMA4DQ92854 MIR4666A-201ENST00000580160 79 ntBASIC4.29□□□□□ -1.72
SEMA4DQ92854 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SEMA4DQ92854 AC115085.1-201ENST00000588924 229 ntBASIC4.29□□□□□ -1.72
SEMA4DQ92854 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.29□□□□□ -1.72
SEMA4DQ92854 RNU4-89P-201ENST00000607443 133 ntBASIC4.29□□□□□ -1.72
SEMA4DQ92854 AC018926.3-201ENST00000618841 406 ntBASIC4.29□□□□□ -1.72
SEMA4DQ92854 AC109454.4-201ENST00000623411 649 ntBASIC4.29□□□□□ -1.72
SEMA4DQ92854 AC124312.6-202ENST00000623624 418 ntBASIC4.29□□□□□ -1.72
SEMA4DQ92854 AC112484.5-201ENST00000624189 228 ntBASIC4.29□□□□□ -1.72
SEMA4DQ92854 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.29□□□□□ -1.72
SEMA4DQ92854 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.29□□□□□ -1.72
SEMA4DQ92854 CDRT1-208ENST00000630868 794 ntBASIC4.29□□□□□ -1.72
SEMA4DQ92854 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.29□□□□□ -1.72
SEMA4DQ92854 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SEMA4DQ92854 AC119744.1-201ENST00000454746 1715 ntBASIC4.29□□□□□ -1.72
SEMA4DQ92854 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SEMA4DQ92854 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SEMA4DQ92854 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.28□□□□□ -1.72
SEMA4DQ92854 AC025263.3-201ENST00000622965 1396 ntBASIC4.28□□□□□ -1.72
SEMA4DQ92854 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SEMA4DQ92854 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.28□□□□□ -1.72
SEMA4DQ92854 AL353743.4-201ENST00000422653 1547 ntBASIC4.28□□□□□ -1.72
SEMA4DQ92854 MIR448-201ENST00000362131 111 ntBASIC4.28□□□□□ -1.72
SEMA4DQ92854 SNORA70.2-201ENST00000364506 135 ntBASIC4.28□□□□□ -1.72
SEMA4DQ92854 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.28□□□□□ -1.72
SEMA4DQ92854 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SEMA4DQ92854 Y_RNA.472-201ENST00000384322 102 ntBASIC4.28□□□□□ -1.72
SEMA4DQ92854 AL136310.1-201ENST00000404926 654 ntBASIC4.28□□□□□ -1.72
SEMA4DQ92854 NPM1P24-201ENST00000428039 894 ntBASIC4.28□□□□□ -1.72
SEMA4DQ92854 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.28□□□□□ -1.72
SEMA4DQ92854 UBE2V1P5-201ENST00000440070 405 ntBASIC4.28□□□□□ -1.72
SEMA4DQ92854 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.28□□□□□ -1.72
SEMA4DQ92854 AC112492.1-201ENST00000449607 712 ntBASIC4.28□□□□□ -1.72
SEMA4DQ92854 AC092155.2-201ENST00000454675 477 ntBASIC4.28□□□□□ -1.72
SEMA4DQ92854 RN7SL385P-201ENST00000468873 276 ntBASIC4.28□□□□□ -1.72
SEMA4DQ92854 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SEMA4DQ92854 RPS4XP15-201ENST00000489210 795 ntBASIC4.28□□□□□ -1.72
SEMA4DQ92854 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.28□□□□□ -1.72
SEMA4DQ92854 AC139783.2-201ENST00000504847 1145 ntBASIC4.28□□□□□ -1.72
SEMA4DQ92854 AC108064.1-201ENST00000513791 460 ntBASIC4.28□□□□□ -1.72
SEMA4DQ92854 RNU6-311P-201ENST00000516224 102 ntBASIC4.28□□□□□ -1.72
SEMA4DQ92854 RN7SKP283-201ENST00000517197 270 ntBASIC4.28□□□□□ -1.72
SEMA4DQ92854 RNA5SP179-201ENST00000517284 121 ntBASIC4.28□□□□□ -1.72
SEMA4DQ92854 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.28□□□□□ -1.72
SEMA4DQ92854 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.28□□□□□ -1.72
SEMA4DQ92854 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.28□□□□□ -1.72
SEMA4DQ92854 AC139103.1-201ENST00000534696 1030 ntBASIC4.28□□□□□ -1.72
SEMA4DQ92854 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.28□□□□□ -1.72
SEMA4DQ92854 HMGB3P26-201ENST00000560051 582 ntBASIC4.28□□□□□ -1.72
SEMA4DQ92854 NIFKP8-201ENST00000560500 874 ntBASIC4.28□□□□□ -1.72
SEMA4DQ92854 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.28□□□□□ -1.72
SEMA4DQ92854 AC002487.1-201ENST00000604565 994 ntBASIC4.28□□□□□ -1.72
SEMA4DQ92854 AC091167.4-201ENST00000605079 184 ntBASIC4.28□□□□□ -1.72
SEMA4DQ92854 AC006386.1-201ENST00000619436 415 ntBASIC4.28□□□□□ -1.72
SEMA4DQ92854 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.28□□□□□ -1.72
SEMA4DQ92854 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SEMA4DQ92854 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.28□□□□□ -1.72
SEMA4DQ92854 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SEMA4DQ92854 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
SEMA4DQ92854 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.28□□□□□ -1.72
SEMA4DQ92854 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SEMA4DQ92854 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SEMA4DQ92854 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SEMA4DQ92854 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SEMA4DQ92854 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
SEMA4DQ92854 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SEMA4DQ92854 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SEMA4DQ92854 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.27□□□□□ -1.73
SEMA4DQ92854 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.27□□□□□ -1.73
SEMA4DQ92854 SNORD116-12-201ENST00000384468 92 ntBASIC4.27□□□□□ -1.73
SEMA4DQ92854 RNU6-146P-201ENST00000384602 108 ntBASIC4.27□□□□□ -1.73
SEMA4DQ92854 ATP5F1P2-201ENST00000398143 760 ntBASIC4.27□□□□□ -1.73
SEMA4DQ92854 RPS3AP37-201ENST00000419176 745 ntBASIC4.27□□□□□ -1.73
SEMA4DQ92854 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SEMA4DQ92854 AL691449.1-201ENST00000426570 421 ntBASIC4.27□□□□□ -1.73
SEMA4DQ92854 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.27□□□□□ -1.73
SEMA4DQ92854 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.27□□□□□ -1.73
SEMA4DQ92854 AC083863.1-201ENST00000438811 231 ntBASIC4.27□□□□□ -1.73
SEMA4DQ92854 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.27□□□□□ -1.73
SEMA4DQ92854 ELOCP13-201ENST00000443934 329 ntBASIC4.27□□□□□ -1.73
SEMA4DQ92854 AC114755.5-201ENST00000447760 831 ntBASIC4.27□□□□□ -1.73
SEMA4DQ92854 AL589880.1-201ENST00000448271 287 ntBASIC4.27□□□□□ -1.73
SEMA4DQ92854 AC098826.2-201ENST00000452011 651 ntBASIC4.27□□□□□ -1.73
SEMA4DQ92854 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms