Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 RNU6-213P-201ENST00000384051 104 ntBASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 RNA5SP424-201ENST00000390988 115 ntBASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 AL391417.1-201ENST00000404100 426 ntBASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 NUP35P2-201ENST00000416748 943 ntBASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 RPS15AP40-201ENST00000419621 391 ntBASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 TCEA1P2-201ENST00000420496 906 ntBASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 OR8F1P-201ENST00000425243 930 ntBASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 EIF2S2P3-201ENST00000428356 999 ntBASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 RPL34P26-201ENST00000445636 354 ntBASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 PRELID3BP5-201ENST00000508612 460 ntBASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 RPL12P22-201ENST00000519073 490 ntBASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 AC008489.1-201ENST00000524271 483 ntBASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 TRAV15-201ENST00000556680 249 ntBASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 PARP1P2-201ENST00000556806 195 ntBASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 MIR3690-201ENST00000580266 75 ntBASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 AC022146.1-201ENST00000595307 847 ntBASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 KLKP1-201ENST00000595979 403 ntBASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 AL590392.1-201ENST00000604960 446 ntBASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 AC092653.1-201ENST00000608509 531 ntBASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 AC006946.3-201ENST00000609791 756 ntBASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 MIR6875-201ENST00000617506 72 ntBASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 U6.48-201ENST00000618523 106 ntBASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLHC1Q8NHS4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 MFSD8-236ENST00000641509 4050 ntBASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 RNU6-283P-201ENST00000364788 107 ntBASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 RPL30P2-201ENST00000414021 291 ntBASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 CRYBB2P1-203ENST00000415709 538 ntBASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 AL160175.1-201ENST00000428124 247 ntBASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 TPTE2P6-202ENST00000445572 1007 ntBASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 NANOGP10-201ENST00000453325 895 ntBASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 VN1R17P-201ENST00000472048 1090 ntBASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 AP000893.1-201ENST00000474462 794 ntBASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 AC068587.1-201ENST00000483613 781 ntBASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 TPT1P3-201ENST00000492841 512 ntBASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 TMEM248P1-201ENST00000510579 951 ntBASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 RN7SKP244-201ENST00000516513 307 ntBASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 OR7E13P-201ENST00000526052 910 ntBASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 AC010198.2-201ENST00000550612 259 ntBASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 AL389895.1-201ENST00000554127 252 ntBASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 AC006960.3-201ENST00000561845 705 ntBASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 AGGF1P6-201ENST00000569213 976 ntBASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 AL163642.2-201ENST00000604722 1019 ntBASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 HMGN2P28-201ENST00000606102 262 ntBASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 AC006023.2-201ENST00000609916 167 ntBASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 AC083809.1-201ENST00000615051 472 ntBASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 MIR6810-201ENST00000622701 70 ntBASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CLHC1Q8NHS4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 AC068538.1-201ENST00000376856 336 ntBASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 ZNF602P-201ENST00000405929 924 ntBASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 RPL23AP47-201ENST00000408017 460 ntBASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 AL590103.1-201ENST00000434488 307 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms