Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 HSFY5P-201ENST00000453726 309 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 GTF2IP12-201ENST00000456547 356 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 AC093824.1-201ENST00000508796 343 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 AP003066.2-201ENST00000529375 555 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 AC087894.1-201ENST00000538359 518 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 AC092747.2-201ENST00000545069 983 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 AC023825.1-201ENST00000566704 1030 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 MIR5684-201ENST00000585074 65 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 BNIP3P39-201ENST00000601077 554 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 AC114878.2-201ENST00000604863 1251 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 AC144521.1-201ENST00000607148 956 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 AC090948.1-201ENST00000607464 549 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 AL139089.1-201ENST00000620372 975 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 AC093875.1-201ENST00000623688 504 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 MTND4P9-201ENST00000507819 1346 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 AC091152.2-201ENST00000591628 2569 ntBASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC71LQ8N9Z2 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 RNU6-207P-201ENST00000384137 107 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 RNU6-356P-201ENST00000384140 107 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 RNU6-1000P-201ENST00000391066 106 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AL645927.1-201ENST00000396783 406 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AC013410.2-201ENST00000422627 201 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AC008065.1-201ENST00000428525 348 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 NPM1P34-201ENST00000428821 893 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 NEK4P1-201ENST00000433383 879 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 MTCYBP31-201ENST00000438855 1122 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 RPL12P3-201ENST00000440080 396 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 RAB11AP1-201ENST00000442978 646 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AC239367.2-201ENST00000447309 705 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 MTCO3P16-201ENST00000454456 754 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 RNA5SP246-201ENST00000458909 119 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 snoU13.7-201ENST00000459220 104 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 RN7SL354P-201ENST00000469282 294 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AC126121.1-201ENST00000482313 553 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AC078918.1-201ENST00000498515 228 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 PTGES3P3-201ENST00000511479 482 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 RNU6-202P-201ENST00000515998 96 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 RNA5SP49-201ENST00000516450 115 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 RN7SKP96-201ENST00000516948 297 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 MTND1P6-201ENST00000523621 946 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 MTND2P26-201ENST00000528255 1029 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 CYB5AP5-201ENST00000549779 389 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 TVP23BP1-201ENST00000557500 617 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AC126365.2-201ENST00000580630 379 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 MIR4443-201ENST00000585052 53 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AC008507.2-201ENST00000588402 1176 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AC005191.1-201ENST00000603950 358 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AC091488.1-201ENST00000604239 660 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AC013244.1-201ENST00000604279 193 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AC133644.2-201ENST00000608142 540 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 SDR42E1P1-201ENST00000611327 477 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AC022306.3-201ENST00000619930 550 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AC009269.6-201ENST00000621778 588 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AL109659.3-201ENST00000624985 950 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AL356118.1-201ENST00000635272 1078 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 AL590396.4-201ENST00000636779 956 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC71LQ8N9Z2 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms