Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 SCARNA24.1-201ENST00000516465 137 ntBASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 AC008126.1-201ENST00000549019 480 ntBASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 AC009120.3-201ENST00000563335 499 ntBASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 MIR3672-201ENST00000584290 82 ntBASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 SNORD58B-201ENST00000607313 66 ntBASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 AL512329.2-201ENST00000607350 548 ntBASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 MIR6809-201ENST00000612189 116 ntBASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 AC091953.2-201ENST00000623979 160 ntBASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 U6.104-201ENST00000637979 90 ntBASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 AC024651.2-201ENST00000562480 2098 ntBASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 AC011416.1-201ENST00000514947 1732 ntBASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NPAS3Q8IXF0 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 AC025809.2-201ENST00000625085 1802 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 AC027287.1-201ENST00000553115 1453 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 RNU1-150P-201ENST00000362491 162 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 Y_RNA.64-201ENST00000362845 102 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 RNU6-490P-201ENST00000362985 107 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 RNU4-1-201ENST00000363925 141 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 U3.12-201ENST00000364498 214 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 RNU1-115P-201ENST00000365329 160 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 MIR1203-201ENST00000408812 85 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 RNU4-25P-201ENST00000410569 230 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 BX323014.1-201ENST00000412876 237 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 AL731534.1-201ENST00000434711 269 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 RSU1P2-202ENST00000437884 485 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 AP006222.1-205ENST00000450734 457 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 RANP2-201ENST00000456833 229 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 NF1P3-201ENST00000457709 450 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 RN7SL177P-201ENST00000476596 299 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 GAPDHP62-201ENST00000515313 990 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 RNU6-714P-201ENST00000516963 103 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 RNU6-410P-201ENST00000517006 107 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 RNU6-570P-201ENST00000517051 105 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 RNU6-201P-201ENST00000517100 61 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 AC073581.1-201ENST00000519036 575 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 AC079600.1-201ENST00000550326 297 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 AC121334.2-201ENST00000605387 271 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 DUSP12P1-201ENST00000612874 516 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 AL512624.1-201ENST00000613638 469 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 AP005431.1-201ENST00000618479 319 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 AL159972.1-201ENST00000625150 448 ntBASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
NPAS3Q8IXF0 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPAS3Q8IXF0 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NPAS3Q8IXF0 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.42□□□□□ -1.38
NPAS3Q8IXF0 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPAS3Q8IXF0 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPAS3Q8IXF0 AC005034.3-201ENST00000604845 1747 ntBASIC6.42□□□□□ -1.38
NPAS3Q8IXF0 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NPAS3Q8IXF0 AC112243.1-201ENST00000623949 3851 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms