Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 AP001804.2-201ENST00000533932 910 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 BNIP3P6-201ENST00000549284 499 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 RPA2P1-201ENST00000556557 721 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 UBE2L4-201ENST00000587688 464 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 AC145423.1-201ENST00000605712 336 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 AL136131.3-201ENST00000607600 188 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 AL096712.1-201ENST00000614561 159 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 AL355480.1-201ENST00000629041 99 ntBASIC5.35□□□□□ -1.55
ATG4DQ86TL0 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4DQ86TL0 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 Y_RNA.158-201ENST00000363651 101 ntBASIC5.34□□□□□ -1.55
ATG4DQ86TL0 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 SNORA20.2-201ENST00000383922 131 ntBASIC5.34□□□□□ -1.55
ATG4DQ86TL0 Y_RNA.527-201ENST00000384573 102 ntBASIC5.34□□□□□ -1.55
ATG4DQ86TL0 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AC016739.1-201ENST00000405359 345 ntBASIC5.34□□□□□ -1.55
ATG4DQ86TL0 RNU6-370P-201ENST00000411008 104 ntBASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 SNRPEP7-201ENST00000438350 220 ntBASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AC073109.1-201ENST00000445066 978 ntBASIC5.34□□□□□ -1.55
ATG4DQ86TL0 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AC104651.2-201ENST00000447549 528 ntBASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 CFL1P4-201ENST00000451536 498 ntBASIC5.34□□□□□ -1.55
ATG4DQ86TL0 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 MTND3P16-201ENST00000452205 344 ntBASIC5.34□□□□□ -1.55
ATG4DQ86TL0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 APOOP2-201ENST00000461561 539 ntBASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 RPS27P23-201ENST00000487608 251 ntBASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 RPSAP51-201ENST00000497462 645 ntBASIC5.34□□□□□ -1.55
ATG4DQ86TL0 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 Y_RNA.667-201ENST00000516212 107 ntBASIC5.34□□□□□ -1.55
ATG4DQ86TL0 RNA5SP438-201ENST00000516561 112 ntBASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AC104986.1-201ENST00000517978 436 ntBASIC5.34□□□□□ -1.55
ATG4DQ86TL0 IGHV3-63-201ENST00000518422 341 ntBASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.34□□□□□ -1.55
ATG4DQ86TL0 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 HMGN2P47-201ENST00000559378 272 ntBASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AC093519.1-201ENST00000566109 298 ntBASIC5.34□□□□□ -1.55
ATG4DQ86TL0 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 MIR548Y-201ENST00000582739 110 ntBASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AL022345.1-201ENST00000607292 135 ntBASIC5.34□□□□□ -1.55
ATG4DQ86TL0 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AC245014.3-201ENST00000618589 347 ntBASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 AC010149.2-201ENST00000637608 315 ntBASIC5.34□□□□□ -1.55
ATG4DQ86TL0 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4DQ86TL0 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
ATG4DQ86TL0 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
ATG4DQ86TL0 CDY11P-201ENST00000447168 1651 ntBASIC5.34□□□□□ -1.56
ATG4DQ86TL0 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
ATG4DQ86TL0 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.56
ATG4DQ86TL0 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
ATG4DQ86TL0 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
ATG4DQ86TL0 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
ATG4DQ86TL0 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.33□□□□□ -1.56
ATG4DQ86TL0 AL359955.1-201ENST00000455242 3275 ntBASIC5.33□□□□□ -1.56
ATG4DQ86TL0 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms