Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 MIR5096-201ENST00000583713 70 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 OR4G1P-201ENST00000588632 938 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 MTCO2P2-201ENST00000591258 225 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AP001160.4-201ENST00000596971 382 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AC010201.1-201ENST00000605051 540 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AL136295.6-201ENST00000610486 658 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 MIR7641-1-201ENST00000627518 61 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AC087821.2-201ENST00000637086 450 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AC011266.1-201ENST00000624119 3569 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 AC066616.2-201ENST00000559334 1481 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 EXOC5P1-201ENST00000510543 1969 ntBASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.11□□□□□ -1.75
NUP54Q7Z3B4 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AC000367.1-201ENST00000452711 1766 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 RNU1-94P-201ENST00000362627 173 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 SNORA51.2-201ENST00000364595 132 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 RNU1-63P-201ENST00000383902 164 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 RNU1-44P-201ENST00000384453 163 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 MIR3065-201ENST00000390137 79 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 GSTA8P-201ENST00000404253 637 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 HDGFP1-201ENST00000405943 252 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 RN7SKP216-201ENST00000411050 312 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 ELOCP19-201ENST00000411919 318 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AC011998.1-201ENST00000433403 117 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AC010881.1-201ENST00000433830 235 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AL132765.1-201ENST00000434165 553 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 OR10R1P-201ENST00000441524 1141 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 NPM1P49-201ENST00000448027 714 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AL009048.1-201ENST00000450437 298 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 RPS15AP1-201ENST00000457423 391 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 RPS27AP17-201ENST00000463344 455 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 RN7SL459P-201ENST00000481078 302 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 NCOR1P1-202ENST00000486162 291 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AC005726.1-201ENST00000494679 427 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 STMN1P2-201ENST00000508435 439 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AP001372.4-201ENST00000524889 472 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AL132857.1-201ENST00000555180 708 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 RPL23AP97-201ENST00000568955 471 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AC008745.1-201ENST00000604064 271 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 RNU4-5P-201ENST00000607255 135 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AC020634.1-201ENST00000608701 549 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AC009237.15-201ENST00000610252 501 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AL138478.1-201ENST00000612252 832 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AC105227.2-201ENST00000615075 605 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AL355578.1-201ENST00000607405 1328 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 KPNA2P2-201ENST00000419546 1489 ntBASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NUP54Q7Z3B4 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 ZNF29P-201ENST00000225587 168 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 RNA5SP447-201ENST00000363749 119 ntBASIC4.09□□□□□ -1.75
NUP54Q7Z3B4 RNU1-32P-201ENST00000363937 159 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms