Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 TRAV8-5-201ENST00000537369 341 ntBASIC3.88□□□□□ -1.79
NHLRC1Q6VVB1 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.88□□□□□ -1.79
NHLRC1Q6VVB1 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.88□□□□□ -1.79
NHLRC1Q6VVB1 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.88□□□□□ -1.79
NHLRC1Q6VVB1 MIR4330-201ENST00000579077 105 ntBASIC3.88□□□□□ -1.79
NHLRC1Q6VVB1 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.88□□□□□ -1.79
NHLRC1Q6VVB1 AL158050.2-201ENST00000605336 568 ntBASIC3.88□□□□□ -1.79
NHLRC1Q6VVB1 AL031666.3-201ENST00000609320 1006 ntBASIC3.88□□□□□ -1.79
NHLRC1Q6VVB1 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NHLRC1Q6VVB1 AL021997.2-201ENST00000615674 271 ntBASIC3.88□□□□□ -1.79
NHLRC1Q6VVB1 AL138721.1-201ENST00000616756 179 ntBASIC3.88□□□□□ -1.79
NHLRC1Q6VVB1 RN7SL722P-201ENST00000617780 284 ntBASIC3.88□□□□□ -1.79
NHLRC1Q6VVB1 RN7SL565P-201ENST00000618246 284 ntBASIC3.88□□□□□ -1.79
NHLRC1Q6VVB1 AL731566.2-201ENST00000618971 317 ntBASIC3.88□□□□□ -1.79
NHLRC1Q6VVB1 FP325313.1-201ENST00000638228 703 ntBASIC3.88□□□□□ -1.79
NHLRC1Q6VVB1 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.88□□□□□ -1.79
NHLRC1Q6VVB1 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NHLRC1Q6VVB1 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
NHLRC1Q6VVB1 AC117529.2-201ENST00000512159 2068 ntBASIC3.88□□□□□ -1.79
NHLRC1Q6VVB1 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NHLRC1Q6VVB1 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NHLRC1Q6VVB1 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.88□□□□□ -1.79
NHLRC1Q6VVB1 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AC000367.1-201ENST00000452711 1766 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 RNU6-492P-201ENST00000363035 104 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 RNA5SP513-201ENST00000364648 118 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AL583835.1-201ENST00000399570 407 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AL079342.2-201ENST00000403367 482 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 RPL26P29-201ENST00000415623 438 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AC027644.1-201ENST00000419595 298 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 TCEA1P2-201ENST00000420496 906 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 HMGB1P16-201ENST00000447155 540 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 RPL35AP15-201ENST00000468042 339 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 RN7SL812P-201ENST00000493791 279 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 FTH1P9-201ENST00000513251 355 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 RNU6-276P-201ENST00000516114 96 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 PHBP17-201ENST00000528576 541 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 CYP4A43P-201ENST00000568156 121 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 MIR5708-201ENST00000579723 85 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AC096947.1-201ENST00000603233 470 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AC008745.1-201ENST00000604064 271 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AL354984.3-201ENST00000604803 325 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AL139022.2-201ENST00000606934 443 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AL121873.1-201ENST00000616013 524 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 uc_338.13-201ENST00000618243 179 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AL713922.2-201ENST00000619384 716 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AC011266.1-201ENST00000624119 3569 ntBASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NHLRC1Q6VVB1 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
NHLRC1Q6VVB1 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NHLRC1Q6VVB1 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NHLRC1Q6VVB1 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NHLRC1Q6VVB1 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.86□□□□□ -1.79
NHLRC1Q6VVB1 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.86□□□□□ -1.79
NHLRC1Q6VVB1 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NHLRC1Q6VVB1 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NHLRC1Q6VVB1 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
NHLRC1Q6VVB1 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NHLRC1Q6VVB1 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
NHLRC1Q6VVB1 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
NHLRC1Q6VVB1 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms