Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.55□□□□□ -1.68
CTR9Q6PD62 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.55□□□□□ -1.68
CTR9Q6PD62 TPTE2P3-201ENST00000441562 1189 ntBASIC4.55□□□□□ -1.68
CTR9Q6PD62 AC044797.1-201ENST00000445744 679 ntBASIC4.55□□□□□ -1.68
CTR9Q6PD62 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.55□□□□□ -1.68
CTR9Q6PD62 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.55□□□□□ -1.68
CTR9Q6PD62 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTR9Q6PD62 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.55□□□□□ -1.68
CTR9Q6PD62 AC069499.1-201ENST00000489433 509 ntBASIC4.55□□□□□ -1.68
CTR9Q6PD62 RPL7P47-201ENST00000497299 556 ntBASIC4.55□□□□□ -1.68
CTR9Q6PD62 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.55□□□□□ -1.68
CTR9Q6PD62 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.55□□□□□ -1.68
CTR9Q6PD62 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CTR9Q6PD62 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.55□□□□□ -1.68
CTR9Q6PD62 AC133963.2-201ENST00000513686 578 ntBASIC4.55□□□□□ -1.68
CTR9Q6PD62 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.55□□□□□ -1.68
CTR9Q6PD62 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.55□□□□□ -1.68
CTR9Q6PD62 SNORA31.13-201ENST00000516624 135 ntBASIC4.55□□□□□ -1.68
CTR9Q6PD62 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.55□□□□□ -1.68
CTR9Q6PD62 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
CTR9Q6PD62 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.55□□□□□ -1.68
CTR9Q6PD62 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.55□□□□□ -1.68
CTR9Q6PD62 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.55□□□□□ -1.68
CTR9Q6PD62 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.55□□□□□ -1.68
CTR9Q6PD62 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.55□□□□□ -1.68
CTR9Q6PD62 AC093510.2-201ENST00000562820 896 ntBASIC4.55□□□□□ -1.68
CTR9Q6PD62 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CTR9Q6PD62 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.55□□□□□ -1.68
CTR9Q6PD62 ABI1P1-201ENST00000603375 1120 ntBASIC4.55□□□□□ -1.68
CTR9Q6PD62 AC005344.1-201ENST00000613391 459 ntBASIC4.55□□□□□ -1.68
CTR9Q6PD62 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.55□□□□□ -1.68
CTR9Q6PD62 AC079684.1-201ENST00000621405 437 ntBASIC4.55□□□□□ -1.68
CTR9Q6PD62 CR392039.5-201ENST00000623201 510 ntBASIC4.55□□□□□ -1.68
CTR9Q6PD62 AC244205.2-202ENST00000635781 342 ntBASIC4.55□□□□□ -1.68
CTR9Q6PD62 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.55□□□□□ -1.68
CTR9Q6PD62 CASC19-284ENST00000642142 1868 ntBASIC4.55□□□□□ -1.68
CTR9Q6PD62 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTR9Q6PD62 AP004289.2-201ENST00000444413 1457 ntBASIC4.55□□□□□ -1.68
CTR9Q6PD62 AC100871.1-201ENST00000507871 1456 ntBASIC4.55□□□□□ -1.68
CTR9Q6PD62 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
CTR9Q6PD62 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CTR9Q6PD62 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.54□□□□□ -1.68
CTR9Q6PD62 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.54□□□□□ -1.68
CTR9Q6PD62 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CTR9Q6PD62 SOD2P1-201ENST00000396543 562 ntBASIC4.54□□□□□ -1.68
CTR9Q6PD62 SNORA57.3-201ENST00000411095 141 ntBASIC4.54□□□□□ -1.68
CTR9Q6PD62 MTND2P15-201ENST00000418575 892 ntBASIC4.54□□□□□ -1.68
CTR9Q6PD62 NPM1P34-201ENST00000428821 893 ntBASIC4.54□□□□□ -1.68
CTR9Q6PD62 AC018644.1-201ENST00000429934 551 ntBASIC4.54□□□□□ -1.68
CTR9Q6PD62 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.54□□□□□ -1.68
CTR9Q6PD62 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.54□□□□□ -1.68
CTR9Q6PD62 SDR42E1P3-201ENST00000438345 502 ntBASIC4.54□□□□□ -1.68
CTR9Q6PD62 MOB1AP2-201ENST00000446060 614 ntBASIC4.54□□□□□ -1.68
CTR9Q6PD62 AC069540.1-201ENST00000446320 988 ntBASIC4.54□□□□□ -1.68
CTR9Q6PD62 AL133162.1-201ENST00000463228 453 ntBASIC4.54□□□□□ -1.68
CTR9Q6PD62 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.54□□□□□ -1.68
CTR9Q6PD62 ACTR3P3-201ENST00000480448 893 ntBASIC4.54□□□□□ -1.68
CTR9Q6PD62 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.54□□□□□ -1.68
CTR9Q6PD62 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.54□□□□□ -1.68
CTR9Q6PD62 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.54□□□□□ -1.68
CTR9Q6PD62 AC026726.1-201ENST00000512859 601 ntBASIC4.54□□□□□ -1.68
CTR9Q6PD62 RNU6-334P-201ENST00000517072 102 ntBASIC4.54□□□□□ -1.68
CTR9Q6PD62 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.54□□□□□ -1.68
CTR9Q6PD62 HMGB1P23-201ENST00000518743 568 ntBASIC4.54□□□□□ -1.68
CTR9Q6PD62 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.54□□□□□ -1.68
CTR9Q6PD62 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.54□□□□□ -1.68
CTR9Q6PD62 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.54□□□□□ -1.68
CTR9Q6PD62 AC008083.2-201ENST00000546707 476 ntBASIC4.54□□□□□ -1.68
CTR9Q6PD62 AC104229.1-201ENST00000561364 255 ntBASIC4.54□□□□□ -1.68
CTR9Q6PD62 AC128687.2-201ENST00000609657 566 ntBASIC4.54□□□□□ -1.68
CTR9Q6PD62 AC110792.4-201ENST00000609843 298 ntBASIC4.54□□□□□ -1.68
CTR9Q6PD62 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.54□□□□□ -1.68
CTR9Q6PD62 AC011472.4-201ENST00000615848 491 ntBASIC4.54□□□□□ -1.68
CTR9Q6PD62 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.54□□□□□ -1.68
CTR9Q6PD62 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.54□□□□□ -1.68
CTR9Q6PD62 UBE3AP2-201ENST00000429033 2259 ntBASIC4.54□□□□□ -1.68
CTR9Q6PD62 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CTR9Q6PD62 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CTR9Q6PD62 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.54□□□□□ -1.68
CTR9Q6PD62 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
CTR9Q6PD62 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CTR9Q6PD62 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CTR9Q6PD62 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.53□□□□□ -1.68
CTR9Q6PD62 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
CTR9Q6PD62 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.53□□□□□ -1.68
CTR9Q6PD62 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CTR9Q6PD62 MTND5P11-201ENST00000511037 1812 ntBASIC4.53□□□□□ -1.68
CTR9Q6PD62 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.53□□□□□ -1.68
CTR9Q6PD62 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CTR9Q6PD62 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.53□□□□□ -1.68
CTR9Q6PD62 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CTR9Q6PD62 RNU6-185P-201ENST00000384421 107 ntBASIC4.53□□□□□ -1.68
CTR9Q6PD62 RNU6-328P-201ENST00000390887 106 ntBASIC4.53□□□□□ -1.68
CTR9Q6PD62 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.53□□□□□ -1.68
CTR9Q6PD62 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CTR9Q6PD62 AL035458.1-201ENST00000433096 585 ntBASIC4.53□□□□□ -1.68
CTR9Q6PD62 SNORA71B-202ENST00000439232 272 ntBASIC4.53□□□□□ -1.68
CTR9Q6PD62 RPS27P5-201ENST00000444247 244 ntBASIC4.53□□□□□ -1.68
CTR9Q6PD62 AL133547.1-201ENST00000448546 220 ntBASIC4.53□□□□□ -1.68
CTR9Q6PD62 HMGB1P26-201ENST00000452520 628 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms