Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC025809.2-201ENST00000625085 1802 ntBASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC5.83□□□□□ -1.48
RSPO4Q2I0M5 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 RAD17P2-201ENST00000451754 1977 ntBASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 PARP4P2-201ENST00000446672 3326 ntBASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 RNU5E-1-201ENST00000362477 120 ntBASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 Y_RNA.25-201ENST00000362528 102 ntBASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 RNU6-1097P-201ENST00000363586 107 ntBASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 RNU6-310P-201ENST00000384655 107 ntBASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 AC008171.1-201ENST00000395058 200 ntBASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 BTBD10P2-201ENST00000404779 676 ntBASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 SNORA11C-201ENST00000408532 129 ntBASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 RN7SKP266-201ENST00000410232 287 ntBASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 RNU6-193P-201ENST00000410977 107 ntBASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 AL451074.5-201ENST00000415894 435 ntBASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 AF228730.2-201ENST00000438784 848 ntBASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 AC105399.1-202ENST00000447303 205 ntBASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 AC092967.1-201ENST00000449016 481 ntBASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 HMGB1P15-201ENST00000453854 435 ntBASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 AL356010.1-201ENST00000456364 102 ntBASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 AC022215.1-201ENST00000481770 362 ntBASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 AC114728.1-201ENST00000488289 483 ntBASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 AC068831.4-201ENST00000556118 109 ntBASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 MIR4480-201ENST00000582492 71 ntBASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 OR52H1-202ENST00000641796 1061 ntBASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 AC010615.1-201ENST00000594254 1764 ntBASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RSPO4Q2I0M5 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 AL158163.1-201ENST00000603915 1649 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 VPS35P1-201ENST00000563400 1518 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 DDX18P6-201ENST00000450119 1997 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 Y_RNA.81-201ENST00000362997 102 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 RNU6-492P-201ENST00000363035 104 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 RNA5SP350-201ENST00000363298 111 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 Y_RNA.150-201ENST00000363562 102 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 RNU6-777P-201ENST00000364265 104 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 SNORA20.2-201ENST00000383922 131 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 Y_RNA.463-201ENST00000384271 102 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 Y_RNA.530-201ENST00000384587 101 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 RNU6-954P-201ENST00000411355 107 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 MRPL53P1-201ENST00000414323 319 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 AL590135.1-201ENST00000422215 156 ntBASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.81□□□□□ -1.48
RSPO4Q2I0M5 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms