Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
SIX1Q15475 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SIX1Q15475 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SIX1Q15475 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SIX1Q15475 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
SIX1Q15475 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SIX1Q15475 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
SIX1Q15475 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SIX1Q15475 RNU5E-10P-201ENST00000363506 118 ntBASIC3.87□□□□□ -1.79
SIX1Q15475 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
SIX1Q15475 RNU6-932P-201ENST00000391108 106 ntBASIC3.87□□□□□ -1.79
SIX1Q15475 AL022722.2-201ENST00000402519 180 ntBASIC3.87□□□□□ -1.79
SIX1Q15475 RNA5SP317-201ENST00000410176 116 ntBASIC3.87□□□□□ -1.79
SIX1Q15475 RNA5SP311-201ENST00000411290 116 ntBASIC3.87□□□□□ -1.79
SIX1Q15475 LINC01881-201ENST00000416103 412 ntBASIC3.87□□□□□ -1.79
SIX1Q15475 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SIX1Q15475 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.87□□□□□ -1.79
SIX1Q15475 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.87□□□□□ -1.79
SIX1Q15475 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.87□□□□□ -1.79
SIX1Q15475 HSFY3P-201ENST00000444242 1191 ntBASIC3.87□□□□□ -1.79
SIX1Q15475 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.87□□□□□ -1.79
SIX1Q15475 AC006480.1-201ENST00000449887 378 ntBASIC3.87□□□□□ -1.79
SIX1Q15475 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SIX1Q15475 NANOGP10-201ENST00000453325 895 ntBASIC3.87□□□□□ -1.79
SIX1Q15475 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.87□□□□□ -1.79
SIX1Q15475 AC008280.2-201ENST00000455473 307 ntBASIC3.87□□□□□ -1.79
SIX1Q15475 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.87□□□□□ -1.79
SIX1Q15475 RPS7P7-201ENST00000463499 571 ntBASIC3.87□□□□□ -1.79
SIX1Q15475 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.87□□□□□ -1.79
SIX1Q15475 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.87□□□□□ -1.79
SIX1Q15475 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.87□□□□□ -1.79
SIX1Q15475 AC026414.1-201ENST00000504046 698 ntBASIC3.87□□□□□ -1.79
SIX1Q15475 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.87□□□□□ -1.79
SIX1Q15475 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.87□□□□□ -1.79
SIX1Q15475 FTH1P21-201ENST00000512179 511 ntBASIC3.87□□□□□ -1.79
SIX1Q15475 RNA5SP315-201ENST00000516340 116 ntBASIC3.87□□□□□ -1.79
SIX1Q15475 RNA5SP312-201ENST00000517068 116 ntBASIC3.87□□□□□ -1.79
SIX1Q15475 AC022695.1-201ENST00000522089 237 ntBASIC3.87□□□□□ -1.79
SIX1Q15475 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.87□□□□□ -1.79
SIX1Q15475 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
SIX1Q15475 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.87□□□□□ -1.79
SIX1Q15475 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.87□□□□□ -1.79
SIX1Q15475 AC006960.3-201ENST00000561845 705 ntBASIC3.87□□□□□ -1.79
SIX1Q15475 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.87□□□□□ -1.79
SIX1Q15475 AL606834.3-201ENST00000602615 496 ntBASIC3.87□□□□□ -1.79
SIX1Q15475 AP002906.1-201ENST00000603405 233 ntBASIC3.87□□□□□ -1.79
SIX1Q15475 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.87□□□□□ -1.79
SIX1Q15475 AC010857.1-201ENST00000606398 594 ntBASIC3.87□□□□□ -1.79
SIX1Q15475 AC096586.1-201ENST00000610267 561 ntBASIC3.87□□□□□ -1.79
SIX1Q15475 MIR6500-201ENST00000622700 86 ntBASIC3.87□□□□□ -1.79
SIX1Q15475 AP002967.1-201ENST00000624203 539 ntBASIC3.87□□□□□ -1.79
SIX1Q15475 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.87□□□□□ -1.79
SIX1Q15475 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.87□□□□□ -1.79
SIX1Q15475 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SIX1Q15475 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SIX1Q15475 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SIX1Q15475 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SIX1Q15475 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
SIX1Q15475 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SIX1Q15475 RNA5SP42-201ENST00000364278 115 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
SIX1Q15475 RNU6-98P-201ENST00000384173 107 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 RNU6-298P-201ENST00000390888 96 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 AL138878.1-201ENST00000405131 347 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.86□□□□□ -1.79
SIX1Q15475 AMD1P2-201ENST00000412936 992 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 MTCO3P21-201ENST00000430791 643 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.86□□□□□ -1.79
SIX1Q15475 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.86□□□□□ -1.79
SIX1Q15475 RPL7P29-201ENST00000437151 728 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.86□□□□□ -1.79
SIX1Q15475 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.86□□□□□ -1.79
SIX1Q15475 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.86□□□□□ -1.79
SIX1Q15475 AL035407.2-201ENST00000454090 378 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 AC005229.2-201ENST00000456995 399 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 snoU109.3-201ENST00000459477 145 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 AC022034.3-201ENST00000471393 478 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SIX1Q15475 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.86□□□□□ -1.79
SIX1Q15475 AC104687.1-201ENST00000485829 412 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 RPS3AP50-201ENST00000487064 803 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SIX1Q15475 GTF2IP9-201ENST00000502460 301 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 AC108064.1-201ENST00000513791 460 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.86□□□□□ -1.79
SIX1Q15475 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.86□□□□□ -1.79
SIX1Q15475 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.86□□□□□ -1.79
SIX1Q15475 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.86□□□□□ -1.79
SIX1Q15475 AP006245.1-201ENST00000522549 120 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.86□□□□□ -1.79
SIX1Q15475 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SIX1Q15475 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.86□□□□□ -1.79
SIX1Q15475 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.86□□□□□ -1.79
SIX1Q15475 PDCD5P1-201ENST00000543528 309 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 AC008011.1-201ENST00000545989 227 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 CYB5AP5-201ENST00000549779 389 ntBASIC3.86□□□□□ -1.79
SIX1Q15475 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.86□□□□□ -1.79
SIX1Q15475 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms