Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL031320.1-201ENST00000604177 357 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 AC010975.3-201ENST00000618727 978 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.93□□□□□ -1.78
SCN1BQ07699 AC123767.1-202ENST00000620407 817 ntBASIC3.93□□□□□ -1.78
SCN1BQ07699 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.93□□□□□ -1.78
SCN1BQ07699 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.93□□□□□ -1.78
SCN1BQ07699 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SCN1BQ07699 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SCN1BQ07699 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.92□□□□□ -1.78
SCN1BQ07699 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SCN1BQ07699 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.92□□□□□ -1.78
SCN1BQ07699 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.92□□□□□ -1.78
SCN1BQ07699 MARK2P15-201ENST00000432204 2186 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.92□□□□□ -1.78
SCN1BQ07699 AC007685.1-201ENST00000329806 452 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 SNORA31-201ENST00000362607 130 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 RNA5SP307-201ENST00000362863 116 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 SNORA51.6-201ENST00000384151 125 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 MIR122-201ENST00000385044 85 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 MIR607-201ENST00000385241 96 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.92□□□□□ -1.78
SCN1BQ07699 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.92□□□□□ -1.78
SCN1BQ07699 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.92□□□□□ -1.78
SCN1BQ07699 BX510359.3-201ENST00000422168 306 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.92□□□□□ -1.78
SCN1BQ07699 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 NRBF2P3-201ENST00000432731 865 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 MRPS18BP2-201ENST00000434310 759 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 RPL21P112-201ENST00000434403 463 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 AL627308.1-201ENST00000435693 821 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 AC112492.1-201ENST00000449607 712 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 DDX39BP2-208ENST00000453923 258 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.92□□□□□ -1.78
SCN1BQ07699 RN7SL177P-201ENST00000476596 299 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 RPL7P16-201ENST00000479738 738 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 AC004453.1-201ENST00000487895 408 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 AC092045.1-201ENST00000495716 1231 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.92□□□□□ -1.78
SCN1BQ07699 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SCN1BQ07699 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.92□□□□□ -1.78
SCN1BQ07699 MIR2114-201ENST00000516645 80 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.92□□□□□ -1.78
SCN1BQ07699 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.92□□□□□ -1.78
SCN1BQ07699 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.92□□□□□ -1.78
SCN1BQ07699 AL389895.1-201ENST00000554127 252 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.92□□□□□ -1.78
SCN1BQ07699 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.92□□□□□ -1.78
SCN1BQ07699 AC138915.2-201ENST00000569776 97 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.92□□□□□ -1.78
SCN1BQ07699 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.92□□□□□ -1.78
SCN1BQ07699 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SCN1BQ07699 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SCN1BQ07699 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SCN1BQ07699 DPRXP5-201ENST00000604662 539 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 AL139022.2-201ENST00000606934 443 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.92□□□□□ -1.78
SCN1BQ07699 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SCN1BQ07699 PART1_2.1-201ENST00000612397 250 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 AC103798.2-201ENST00000624292 632 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 AL355480.1-201ENST00000629041 99 ntBASIC3.92□□□□□ -1.78
SCN1BQ07699 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SCN1BQ07699 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SCN1BQ07699 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SCN1BQ07699 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.91□□□□□ -1.78
SCN1BQ07699 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
SCN1BQ07699 FAM91A3P-201ENST00000456826 2544 ntBASIC3.91□□□□□ -1.78
SCN1BQ07699 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SCN1BQ07699 SNORA74A-201ENST00000364089 198 ntBASIC3.91□□□□□ -1.78
SCN1BQ07699 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.91□□□□□ -1.78
SCN1BQ07699 RN7SKP267-201ENST00000410381 285 ntBASIC3.91□□□□□ -1.78
SCN1BQ07699 LUZP4P1-201ENST00000415420 344 ntBASIC3.91□□□□□ -1.78
SCN1BQ07699 OR4K6P-201ENST00000416478 897 ntBASIC3.91□□□□□ -1.78
SCN1BQ07699 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.91□□□□□ -1.78
SCN1BQ07699 RPF2P1-201ENST00000424137 906 ntBASIC3.91□□□□□ -1.78
SCN1BQ07699 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC3.91□□□□□ -1.78
SCN1BQ07699 GTF2IP7-202ENST00000436677 309 ntBASIC3.91□□□□□ -1.78
SCN1BQ07699 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SCN1BQ07699 MTCO1P53-201ENST00000441633 699 ntBASIC3.91□□□□□ -1.78
SCN1BQ07699 AL034418.1-201ENST00000448675 860 ntBASIC3.91□□□□□ -1.78
SCN1BQ07699 AC104763.1-201ENST00000475274 360 ntBASIC3.91□□□□□ -1.78
SCN1BQ07699 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.91□□□□□ -1.78
SCN1BQ07699 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.91□□□□□ -1.78
SCN1BQ07699 OR4G11P-201ENST00000492842 939 ntBASIC3.91□□□□□ -1.78
SCN1BQ07699 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SCN1BQ07699 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SCN1BQ07699 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.91□□□□□ -1.78
SCN1BQ07699 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.91□□□□□ -1.78
SCN1BQ07699 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.91□□□□□ -1.78
SCN1BQ07699 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.91□□□□□ -1.78
SCN1BQ07699 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.91□□□□□ -1.78
SCN1BQ07699 GTF2IP8-201ENST00000560687 584 ntBASIC3.91□□□□□ -1.78
SCN1BQ07699 AC044860.2-201ENST00000561005 179 ntBASIC3.91□□□□□ -1.78
SCN1BQ07699 MIR4646-201ENST00000580775 63 ntBASIC3.91□□□□□ -1.78
SCN1BQ07699 MIR3667-201ENST00000581025 74 ntBASIC3.91□□□□□ -1.78
SCN1BQ07699 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.91□□□□□ -1.78
SCN1BQ07699 AL391358.1-201ENST00000605342 190 ntBASIC3.91□□□□□ -1.78
SCN1BQ07699 AC006329.2-201ENST00000611491 394 ntBASIC3.91□□□□□ -1.78
SCN1BQ07699 AC023043.4-201ENST00000612081 449 ntBASIC3.91□□□□□ -1.78
SCN1BQ07699 AC078899.5-201ENST00000612475 178 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms