Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC109583.1-201ENST00000432156 268 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.72□□□□□ -1.65
NKX6-1P78426 PSMD10P3-201ENST00000437000 448 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 RPS11P7-201ENST00000442125 465 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.72□□□□□ -1.65
NKX6-1P78426 NOP56P2-201ENST00000447491 769 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 USP9YP12-201ENST00000450481 570 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.72□□□□□ -1.65
NKX6-1P78426 ABCC13-202ENST00000463099 3842 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.72□□□□□ -1.65
NKX6-1P78426 RN7SL188P-201ENST00000469842 285 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 AC006463.2-201ENST00000473326 348 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 AC087385.1-201ENST00000475062 312 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.72□□□□□ -1.65
NKX6-1P78426 CEACAMP10-202ENST00000495431 496 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NKX6-1P78426 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.72□□□□□ -1.65
NKX6-1P78426 AP003392.2-201ENST00000527269 208 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 PTP4A1P6-201ENST00000531034 478 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.72□□□□□ -1.65
NKX6-1P78426 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NKX6-1P78426 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NKX6-1P78426 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX6-1P78426 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.72□□□□□ -1.65
NKX6-1P78426 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX6-1P78426 LSM3P2-201ENST00000551246 273 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.72□□□□□ -1.65
NKX6-1P78426 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.72□□□□□ -1.65
NKX6-1P78426 ZNF519P3-201ENST00000557158 1032 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX6-1P78426 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.72□□□□□ -1.65
NKX6-1P78426 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.72□□□□□ -1.65
NKX6-1P78426 MIR4307-201ENST00000582802 84 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX6-1P78426 AC022916.3-201ENST00000592961 742 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX6-1P78426 SEPT7P9-203ENST00000604116 343 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 AC005332.10-201ENST00000612725 619 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 AC108479.2-201ENST00000617314 601 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 AL139089.1-201ENST00000620372 975 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 AC004009.2-201ENST00000623016 728 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.72□□□□□ -1.65
NKX6-1P78426 AC074101.1-201ENST00000637861 241 ntBASIC4.72□□□□□ -1.65
NKX6-1P78426 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX6-1P78426 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX6-1P78426 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NKX6-1P78426 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NKX6-1P78426 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.72□□□□□ -1.65
NKX6-1P78426 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.72□□□□□ -1.65
NKX6-1P78426 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NKX6-1P78426 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
NKX6-1P78426 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.72□□□□□ -1.65
NKX6-1P78426 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX6-1P78426 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
NKX6-1P78426 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
NKX6-1P78426 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NKX6-1P78426 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.71□□□□□ -1.66
NKX6-1P78426 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NKX6-1P78426 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NKX6-1P78426 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
NKX6-1P78426 RNU6-28P-201ENST00000362378 107 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 RNU1-43P-201ENST00000365052 165 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NKX6-1P78426 RNU1-106P-201ENST00000384382 164 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 RPL31P1-201ENST00000398116 372 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NKX6-1P78426 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 Y_RNA.598-201ENST00000410480 95 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.71□□□□□ -1.66
NKX6-1P78426 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.71□□□□□ -1.66
NKX6-1P78426 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.71□□□□□ -1.66
NKX6-1P78426 AC108075.1-201ENST00000424692 529 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 PSMA2P3-201ENST00000429685 675 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.71□□□□□ -1.66
NKX6-1P78426 USP9YP14-201ENST00000430663 563 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.71□□□□□ -1.66
NKX6-1P78426 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.71□□□□□ -1.66
NKX6-1P78426 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.71□□□□□ -1.66
NKX6-1P78426 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.71□□□□□ -1.66
NKX6-1P78426 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.71□□□□□ -1.66
NKX6-1P78426 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.71□□□□□ -1.66
NKX6-1P78426 LINC02210-201ENST00000444561 288 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.71□□□□□ -1.66
NKX6-1P78426 RPL7L1P1-201ENST00000448259 785 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 AC005297.2-201ENST00000450430 606 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NKX6-1P78426 HMGB1P15-201ENST00000453854 435 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 MTCYBP1-201ENST00000454315 1119 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 AL389915.2-201ENST00000454576 441 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.71□□□□□ -1.66
NKX6-1P78426 AC022034.3-201ENST00000471393 478 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 AC007686.1-201ENST00000488511 463 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.71□□□□□ -1.66
NKX6-1P78426 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.71□□□□□ -1.66
NKX6-1P78426 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.71□□□□□ -1.66
NKX6-1P78426 AC109464.2-201ENST00000510242 943 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 AC010625.1-201ENST00000511296 403 ntBASIC4.71□□□□□ -1.66
NKX6-1P78426 MTND6P2-201ENST00000512226 524 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms