Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TRBV8-2-201ENST00000475637 270 ntBASIC3.11□□□□□ -1.91
HIST1H3AP68431 AC068587.1-201ENST00000483613 781 ntBASIC3.11□□□□□ -1.91
HIST1H3AP68431 FCF1P3-201ENST00000496394 590 ntBASIC3.11□□□□□ -1.91
HIST1H3AP68431 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.11□□□□□ -1.91
HIST1H3AP68431 ARL2BPP6-201ENST00000512757 439 ntBASIC3.11□□□□□ -1.91
HIST1H3AP68431 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.11□□□□□ -1.91
HIST1H3AP68431 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.11□□□□□ -1.91
HIST1H3AP68431 AL139174.1-201ENST00000531489 886 ntBASIC3.11□□□□□ -1.91
HIST1H3AP68431 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.11□□□□□ -1.91
HIST1H3AP68431 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.11□□□□□ -1.91
HIST1H3AP68431 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.11□□□□□ -1.91
HIST1H3AP68431 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.11□□□□□ -1.91
HIST1H3AP68431 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.11□□□□□ -1.91
HIST1H3AP68431 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.11□□□□□ -1.91
HIST1H3AP68431 MIR4425-201ENST00000580572 84 ntBASIC3.11□□□□□ -1.91
HIST1H3AP68431 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.11□□□□□ -1.91
HIST1H3AP68431 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.11□□□□□ -1.91
HIST1H3AP68431 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.11□□□□□ -1.91
HIST1H3AP68431 AL365503.1-201ENST00000605247 905 ntBASIC3.11□□□□□ -1.91
HIST1H3AP68431 AC055764.2-201ENST00000610089 670 ntBASIC3.11□□□□□ -1.91
HIST1H3AP68431 CR392039.4-201ENST00000624968 501 ntBASIC3.11□□□□□ -1.91
HIST1H3AP68431 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HIST1H3AP68431 AC007823.1-201ENST00000569932 1566 ntBASIC3.11□□□□□ -1.91
HIST1H3AP68431 AC119744.1-201ENST00000454746 1715 ntBASIC3.1□□□□□ -1.91
HIST1H3AP68431 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
HIST1H3AP68431 AP001148.1-201ENST00000624124 2359 ntBASIC3.1□□□□□ -1.91
HIST1H3AP68431 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
HIST1H3AP68431 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HIST1H3AP68431 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HIST1H3AP68431 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HIST1H3AP68431 SNORD3H-201ENST00000384486 214 ntBASIC3.1□□□□□ -1.91
HIST1H3AP68431 PTMAP5-201ENST00000393073 333 ntBASIC3.1□□□□□ -1.91
HIST1H3AP68431 AL136116.1-201ENST00000403591 381 ntBASIC3.1□□□□□ -1.91
HIST1H3AP68431 LIPT1P1-201ENST00000415870 1186 ntBASIC3.1□□□□□ -1.91
HIST1H3AP68431 AC017079.2-201ENST00000416102 485 ntBASIC3.1□□□□□ -1.91
HIST1H3AP68431 AC068533.1-201ENST00000418542 415 ntBASIC3.1□□□□□ -1.91
HIST1H3AP68431 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.1□□□□□ -1.91
HIST1H3AP68431 AL031736.2-201ENST00000426573 787 ntBASIC3.1□□□□□ -1.91
HIST1H3AP68431 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.1□□□□□ -1.91
HIST1H3AP68431 RRM2P4-201ENST00000441721 562 ntBASIC3.1□□□□□ -1.91
HIST1H3AP68431 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.1□□□□□ -1.91
HIST1H3AP68431 SNORD105B-201ENST00000458770 79 ntBASIC3.1□□□□□ -1.91
HIST1H3AP68431 AC091959.2-201ENST00000477363 321 ntBASIC3.1□□□□□ -1.91
HIST1H3AP68431 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.1□□□□□ -1.91
HIST1H3AP68431 RPL23AP44-201ENST00000482216 473 ntBASIC3.1□□□□□ -1.91
HIST1H3AP68431 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.1□□□□□ -1.91
HIST1H3AP68431 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.1□□□□□ -1.91
HIST1H3AP68431 HIGD1AP18-201ENST00000520730 278 ntBASIC3.1□□□□□ -1.91
HIST1H3AP68431 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.1□□□□□ -1.91
HIST1H3AP68431 HIGD1AP10-201ENST00000527837 282 ntBASIC3.1□□□□□ -1.91
HIST1H3AP68431 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HIST1H3AP68431 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC3.1□□□□□ -1.91
HIST1H3AP68431 BNIP3P38-201ENST00000601117 544 ntBASIC3.1□□□□□ -1.91
HIST1H3AP68431 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.1□□□□□ -1.91
HIST1H3AP68431 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.1□□□□□ -1.91
HIST1H3AP68431 AL391497.1-201ENST00000608671 547 ntBASIC3.1□□□□□ -1.91
HIST1H3AP68431 MIR8058-201ENST00000615737 89 ntBASIC3.1□□□□□ -1.91
HIST1H3AP68431 RPL23AP61-201ENST00000623642 466 ntBASIC3.1□□□□□ -1.91
HIST1H3AP68431 AC119674.1-207ENST00000641355 633 ntBASIC3.1□□□□□ -1.91
HIST1H3AP68431 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HIST1H3AP68431 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HIST1H3AP68431 AL133383.2-201ENST00000622958 2336 ntBASIC3.1□□□□□ -1.91
HIST1H3AP68431 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HIST1H3AP68431 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HIST1H3AP68431 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.1□□□□□ -1.91
HIST1H3AP68431 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
HIST1H3AP68431 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HIST1H3AP68431 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HIST1H3AP68431 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HIST1H3AP68431 RNA5SP479-201ENST00000364858 117 ntBASIC3.09□□□□□ -1.91
HIST1H3AP68431 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
HIST1H3AP68431 MIR1193-201ENST00000408109 78 ntBASIC3.09□□□□□ -1.91
HIST1H3AP68431 AC069218.2-201ENST00000411665 344 ntBASIC3.09□□□□□ -1.91
HIST1H3AP68431 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.09□□□□□ -1.91
HIST1H3AP68431 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.09□□□□□ -1.91
HIST1H3AP68431 AL035423.1-201ENST00000420331 213 ntBASIC3.09□□□□□ -1.91
HIST1H3AP68431 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
HIST1H3AP68431 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HIST1H3AP68431 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.09□□□□□ -1.91
HIST1H3AP68431 CYCSP4-201ENST00000429682 331 ntBASIC3.09□□□□□ -1.91
HIST1H3AP68431 AL158071.1-201ENST00000430315 461 ntBASIC3.09□□□□□ -1.91
HIST1H3AP68431 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.09□□□□□ -1.91
HIST1H3AP68431 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.09□□□□□ -1.91
HIST1H3AP68431 CBX1P4-201ENST00000439415 457 ntBASIC3.09□□□□□ -1.91
HIST1H3AP68431 RPL37P6-202ENST00000464216 403 ntBASIC3.09□□□□□ -1.91
HIST1H3AP68431 AP002884.2-201ENST00000471647 395 ntBASIC3.09□□□□□ -1.91
HIST1H3AP68431 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.09□□□□□ -1.91
HIST1H3AP68431 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.09□□□□□ -1.91
HIST1H3AP68431 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.09□□□□□ -1.91
HIST1H3AP68431 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.09□□□□□ -1.91
HIST1H3AP68431 AC069304.3-201ENST00000603938 1084 ntBASIC3.09□□□□□ -1.91
HIST1H3AP68431 AC048347.1-201ENST00000624621 427 ntBASIC3.09□□□□□ -1.91
HIST1H3AP68431 AC112200.1-201ENST00000625015 234 ntBASIC3.09□□□□□ -1.91
HIST1H3AP68431 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.09□□□□□ -1.91
HIST1H3AP68431 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.09□□□□□ -1.91
HIST1H3AP68431 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
HIST1H3AP68431 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HIST1H3AP68431 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
HIST1H3AP68431 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
HIST1H3AP68431 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms