Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 MAPK10-362ENST00000641864 4484 ntBASIC2.13□□□□□ -2.07
RPL39P62891 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RPL39P62891 MTND5P7-201ENST00000413558 1798 ntBASIC2.13□□□□□ -2.07
RPL39P62891 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.13□□□□□ -2.07
RPL39P62891 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.13□□□□□ -2.07
RPL39P62891 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RPL39P62891 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RPL39P62891 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RPL39P62891 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RPL39P62891 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.12□□□□□ -2.07
RPL39P62891 AL672296.1-201ENST00000427780 2158 ntBASIC2.12□□□□□ -2.07
RPL39P62891 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.12□□□□□ -2.07
RPL39P62891 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RPL39P62891 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.12□□□□□ -2.07
RPL39P62891 RPL9P7-201ENST00000330965 580 ntBASIC2.12□□□□□ -2.07
RPL39P62891 MIR365B-201ENST00000362317 111 ntBASIC2.12□□□□□ -2.07
RPL39P62891 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
RPL39P62891 CASKP1-201ENST00000412870 582 ntBASIC2.12□□□□□ -2.07
RPL39P62891 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.12□□□□□ -2.07
RPL39P62891 SYF2P2-201ENST00000417620 583 ntBASIC2.12□□□□□ -2.07
RPL39P62891 RPA2P2-201ENST00000419698 796 ntBASIC2.12□□□□□ -2.07
RPL39P62891 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.12□□□□□ -2.07
RPL39P62891 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.12□□□□□ -2.07
RPL39P62891 HSPE1P27-201ENST00000430808 296 ntBASIC2.12□□□□□ -2.07
RPL39P62891 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC2.12□□□□□ -2.07
RPL39P62891 MTCYBP31-201ENST00000438855 1122 ntBASIC2.12□□□□□ -2.07
RPL39P62891 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.12□□□□□ -2.07
RPL39P62891 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.12□□□□□ -2.07
RPL39P62891 RPS17P11-201ENST00000474297 293 ntBASIC2.12□□□□□ -2.07
RPL39P62891 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.12□□□□□ -2.07
RPL39P62891 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.12□□□□□ -2.07
RPL39P62891 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.12□□□□□ -2.07
RPL39P62891 RNU6ATAC39P-201ENST00000516309 149 ntBASIC2.12□□□□□ -2.07
RPL39P62891 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC2.12□□□□□ -2.07
RPL39P62891 AC018442.3-201ENST00000523025 183 ntBASIC2.12□□□□□ -2.07
RPL39P62891 OR5G4P-201ENST00000525251 760 ntBASIC2.12□□□□□ -2.07
RPL39P62891 AP000619.3-201ENST00000535634 1127 ntBASIC2.12□□□□□ -2.07
RPL39P62891 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.12□□□□□ -2.07
RPL39P62891 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.12□□□□□ -2.07
RPL39P62891 RN7SL339P-201ENST00000580597 296 ntBASIC2.12□□□□□ -2.07
RPL39P62891 AC069234.5-201ENST00000611056 416 ntBASIC2.12□□□□□ -2.07
RPL39P62891 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.12□□□□□ -2.07
RPL39P62891 MIR6733-201ENST00000635723 61 ntBASIC2.12□□□□□ -2.07
RPL39P62891 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RPL39P62891 ASNSP3-201ENST00000451989 1306 ntBASIC2.12□□□□□ -2.07
RPL39P62891 USP8P1-201ENST00000494673 3183 ntBASIC2.12□□□□□ -2.07
RPL39P62891 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RPL39P62891 DPY19L2P2-203ENST00000435536 1858 ntBASIC2.11□□□□□ -2.07
RPL39P62891 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
RPL39P62891 ASNSP1-201ENST00000518311 1939 ntBASIC2.11□□□□□ -2.07
RPL39P62891 AL136964.1-201ENST00000622038 2990 ntBASIC2.11□□□□□ -2.07
RPL39P62891 MFSD8-220ENST00000641243 1422 ntBASIC2.11□□□□□ -2.07
RPL39P62891 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
RPL39P62891 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC2.11□□□□□ -2.07
RPL39P62891 SNORD15B-201ENST00000384714 146 ntBASIC2.11□□□□□ -2.07
RPL39P62891 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
RPL39P62891 SNORD88.1-201ENST00000408684 91 ntBASIC2.11□□□□□ -2.07
RPL39P62891 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.11□□□□□ -2.07
RPL39P62891 OR1AA1P-201ENST00000419597 916 ntBASIC2.11□□□□□ -2.07
RPL39P62891 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC2.11□□□□□ -2.07
RPL39P62891 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.11□□□□□ -2.07
RPL39P62891 DPY19L1P2-201ENST00000426647 915 ntBASIC2.11□□□□□ -2.07
RPL39P62891 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC2.11□□□□□ -2.07
RPL39P62891 AC004975.1-201ENST00000428733 208 ntBASIC2.11□□□□□ -2.07
RPL39P62891 AL035246.1-201ENST00000433554 1255 ntBASIC2.11□□□□□ -2.07
RPL39P62891 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.11□□□□□ -2.07
RPL39P62891 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.11□□□□□ -2.07
RPL39P62891 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC2.11□□□□□ -2.07
RPL39P62891 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.11□□□□□ -2.07
RPL39P62891 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.11□□□□□ -2.07
RPL39P62891 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.11□□□□□ -2.07
RPL39P62891 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.11□□□□□ -2.07
RPL39P62891 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.11□□□□□ -2.07
RPL39P62891 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.11□□□□□ -2.07
RPL39P62891 FTH1P9-201ENST00000513251 355 ntBASIC2.11□□□□□ -2.07
RPL39P62891 RNA5SP76-201ENST00000516277 87 ntBASIC2.11□□□□□ -2.07
RPL39P62891 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.11□□□□□ -2.07
RPL39P62891 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.11□□□□□ -2.07
RPL39P62891 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RPL39P62891 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.11□□□□□ -2.07
RPL39P62891 OR4H12P-201ENST00000556269 907 ntBASIC2.11□□□□□ -2.07
RPL39P62891 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC2.11□□□□□ -2.07
RPL39P62891 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.11□□□□□ -2.07
RPL39P62891 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RPL39P62891 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC2.11□□□□□ -2.07
RPL39P62891 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.11□□□□□ -2.07
RPL39P62891 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.11□□□□□ -2.07
RPL39P62891 MIR378J-201ENST00000611988 109 ntBASIC2.11□□□□□ -2.07
RPL39P62891 AC107871.2-201ENST00000612894 502 ntBASIC2.11□□□□□ -2.07
RPL39P62891 AC105227.2-201ENST00000615075 605 ntBASIC2.11□□□□□ -2.07
RPL39P62891 AC007318.2-201ENST00000620999 243 ntBASIC2.11□□□□□ -2.07
RPL39P62891 AL034408.1-202ENST00000636088 415 ntBASIC2.11□□□□□ -2.07
RPL39P62891 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
RPL39P62891 OR5AQ1P-203ENST00000641818 1529 ntBASIC2.11□□□□□ -2.07
RPL39P62891 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.11□□□□□ -2.07
RPL39P62891 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RPL39P62891 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RPL39P62891 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
RPL39P62891 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RPL39P62891 AC073325.2-201ENST00000339545 159 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms