Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.52□□□□□ -1.85
VSX2P58304 DNAJC19P1-201ENST00000455312 319 ntBASIC3.52□□□□□ -1.85
VSX2P58304 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.52□□□□□ -1.85
VSX2P58304 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.52□□□□□ -1.85
VSX2P58304 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.52□□□□□ -1.85
VSX2P58304 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.52□□□□□ -1.85
VSX2P58304 AC104619.4-201ENST00000510773 249 ntBASIC3.52□□□□□ -1.85
VSX2P58304 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.52□□□□□ -1.85
VSX2P58304 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.52□□□□□ -1.85
VSX2P58304 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.52□□□□□ -1.85
VSX2P58304 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.52□□□□□ -1.85
VSX2P58304 AC099489.2-201ENST00000574976 260 ntBASIC3.52□□□□□ -1.85
VSX2P58304 MIR4458-201ENST00000578872 75 ntBASIC3.52□□□□□ -1.85
VSX2P58304 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VSX2P58304 AC008739.3-201ENST00000603262 127 ntBASIC3.52□□□□□ -1.85
VSX2P58304 CR589904.2-201ENST00000612533 440 ntBASIC3.52□□□□□ -1.85
VSX2P58304 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.52□□□□□ -1.85
VSX2P58304 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.52□□□□□ -1.85
VSX2P58304 AP000553.6-201ENST00000641242 118 ntBASIC3.52□□□□□ -1.85
VSX2P58304 AL353743.4-201ENST00000422653 1547 ntBASIC3.52□□□□□ -1.85
VSX2P58304 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.52□□□□□ -1.85
VSX2P58304 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
VSX2P58304 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
VSX2P58304 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VSX2P58304 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VSX2P58304 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.51□□□□□ -1.85
VSX2P58304 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VSX2P58304 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
VSX2P58304 SNORA73.2-201ENST00000364946 201 ntBASIC3.51□□□□□ -1.85
VSX2P58304 U3.15-201ENST00000365398 212 ntBASIC3.51□□□□□ -1.85
VSX2P58304 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
VSX2P58304 RNU6-317P-201ENST00000384031 107 ntBASIC3.51□□□□□ -1.85
VSX2P58304 RNU6-452P-201ENST00000384406 107 ntBASIC3.51□□□□□ -1.85
VSX2P58304 MIR449B-201ENST00000384995 97 ntBASIC3.51□□□□□ -1.85
VSX2P58304 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
VSX2P58304 HMGB3P20-201ENST00000417997 600 ntBASIC3.51□□□□□ -1.85
VSX2P58304 AL159169.1-201ENST00000421119 127 ntBASIC3.51□□□□□ -1.85
VSX2P58304 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VSX2P58304 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.51□□□□□ -1.85
VSX2P58304 TRIM60P13-201ENST00000432350 1283 ntBASIC3.51□□□□□ -1.85
VSX2P58304 AL050321.1-201ENST00000432363 400 ntBASIC3.51□□□□□ -1.85
VSX2P58304 MTND2P21-201ENST00000436242 1042 ntBASIC3.51□□□□□ -1.85
VSX2P58304 AC092809.1-201ENST00000441469 474 ntBASIC3.51□□□□□ -1.85
VSX2P58304 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.51□□□□□ -1.85
VSX2P58304 RPS3AP46-201ENST00000448352 682 ntBASIC3.51□□□□□ -1.85
VSX2P58304 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.51□□□□□ -1.85
VSX2P58304 HMGB1P26-201ENST00000452520 628 ntBASIC3.51□□□□□ -1.85
VSX2P58304 CEACAMP4-201ENST00000457676 421 ntBASIC3.51□□□□□ -1.85
VSX2P58304 AC006511.1-201ENST00000470614 315 ntBASIC3.51□□□□□ -1.85
VSX2P58304 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.51□□□□□ -1.85
VSX2P58304 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.51□□□□□ -1.85
VSX2P58304 RN7SKP18-201ENST00000516005 275 ntBASIC3.51□□□□□ -1.85
VSX2P58304 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.51□□□□□ -1.85
VSX2P58304 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.51□□□□□ -1.85
VSX2P58304 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.51□□□□□ -1.85
VSX2P58304 MIR4512-201ENST00000583257 77 ntBASIC3.51□□□□□ -1.85
VSX2P58304 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.51□□□□□ -1.85
VSX2P58304 AC103710.3-201ENST00000608157 948 ntBASIC3.51□□□□□ -1.85
VSX2P58304 AL096803.3-201ENST00000609032 532 ntBASIC3.51□□□□□ -1.85
VSX2P58304 AC012531.5-201ENST00000611375 151 ntBASIC3.51□□□□□ -1.85
VSX2P58304 AP003072.4-201ENST00000624580 310 ntBASIC3.51□□□□□ -1.85
VSX2P58304 AC244205.2-202ENST00000635781 342 ntBASIC3.51□□□□□ -1.85
VSX2P58304 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.51□□□□□ -1.85
VSX2P58304 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.51□□□□□ -1.85
VSX2P58304 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.51□□□□□ -1.85
VSX2P58304 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
VSX2P58304 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.51□□□□□ -1.85
VSX2P58304 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.51□□□□□ -1.85
VSX2P58304 RNF6P1-201ENST00000444889 1784 ntBASIC3.51□□□□□ -1.85
VSX2P58304 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VSX2P58304 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VSX2P58304 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.5□□□□□ -1.85
VSX2P58304 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.5□□□□□ -1.85
VSX2P58304 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
VSX2P58304 SNORD6-201ENST00000365444 73 ntBASIC3.5□□□□□ -1.85
VSX2P58304 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.5□□□□□ -1.85
VSX2P58304 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
VSX2P58304 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.5□□□□□ -1.85
VSX2P58304 RPL31P52-201ENST00000407532 367 ntBASIC3.5□□□□□ -1.85
VSX2P58304 AC105402.1-201ENST00000413336 545 ntBASIC3.5□□□□□ -1.85
VSX2P58304 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.5□□□□□ -1.85
VSX2P58304 PTP4A1P5-201ENST00000420305 455 ntBASIC3.5□□□□□ -1.85
VSX2P58304 RPL37P1-201ENST00000432310 284 ntBASIC3.5□□□□□ -1.85
VSX2P58304 AL645931.1-201ENST00000439737 410 ntBASIC3.5□□□□□ -1.85
VSX2P58304 AC114878.1-201ENST00000441166 358 ntBASIC3.5□□□□□ -1.85
VSX2P58304 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
VSX2P58304 AC010655.1-201ENST00000449336 292 ntBASIC3.5□□□□□ -1.85
VSX2P58304 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.5□□□□□ -1.85
VSX2P58304 AP001086.1-201ENST00000494882 321 ntBASIC3.5□□□□□ -1.85
VSX2P58304 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.5□□□□□ -1.85
VSX2P58304 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.5□□□□□ -1.85
VSX2P58304 RN7SKP209-201ENST00000516888 304 ntBASIC3.5□□□□□ -1.85
VSX2P58304 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.5□□□□□ -1.85
VSX2P58304 TRAV15-201ENST00000556680 249 ntBASIC3.5□□□□□ -1.85
VSX2P58304 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.5□□□□□ -1.85
VSX2P58304 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.5□□□□□ -1.85
VSX2P58304 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.5□□□□□ -1.85
VSX2P58304 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.5□□□□□ -1.85
VSX2P58304 AC015802.5-201ENST00000607478 399 ntBASIC3.5□□□□□ -1.85
VSX2P58304 AC123768.4-201ENST00000616244 701 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms