Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
NUP98P52948 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
NUP98P52948 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
NUP98P52948 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
NUP98P52948 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.92□□□□□ -1.78
NUP98P52948 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NUP98P52948 AC007899.1-201ENST00000412776 775 ntBASIC3.92□□□□□ -1.78
NUP98P52948 OR6K4P-201ENST00000423179 955 ntBASIC3.92□□□□□ -1.78
NUP98P52948 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC3.92□□□□□ -1.78
NUP98P52948 CST9LP2-201ENST00000437612 320 ntBASIC3.92□□□□□ -1.78
NUP98P52948 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.92□□□□□ -1.78
NUP98P52948 RN7SKP132-201ENST00000516001 208 ntBASIC3.92□□□□□ -1.78
NUP98P52948 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.92□□□□□ -1.78
NUP98P52948 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.92□□□□□ -1.78
NUP98P52948 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.92□□□□□ -1.78
NUP98P52948 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
NUP98P52948 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NUP98P52948 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
NUP98P52948 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NUP98P52948 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
NUP98P52948 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
NUP98P52948 SNORA18.3-201ENST00000384122 132 ntBASIC3.91□□□□□ -1.78
NUP98P52948 RNA5SP31-201ENST00000411144 127 ntBASIC3.91□□□□□ -1.78
NUP98P52948 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.91□□□□□ -1.78
NUP98P52948 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.91□□□□□ -1.78
NUP98P52948 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.91□□□□□ -1.78
NUP98P52948 MTCO3P20-201ENST00000454926 688 ntBASIC3.91□□□□□ -1.78
NUP98P52948 RPL23AP94-201ENST00000512518 302 ntBASIC3.91□□□□□ -1.78
NUP98P52948 ARL2BPP6-201ENST00000512757 439 ntBASIC3.91□□□□□ -1.78
NUP98P52948 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.91□□□□□ -1.78
NUP98P52948 AC022882.1-201ENST00000532142 501 ntBASIC3.91□□□□□ -1.78
NUP98P52948 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.91□□□□□ -1.78
NUP98P52948 AC008126.1-201ENST00000549019 480 ntBASIC3.91□□□□□ -1.78
NUP98P52948 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.91□□□□□ -1.78
NUP98P52948 AC015871.2-201ENST00000603605 948 ntBASIC3.91□□□□□ -1.78
NUP98P52948 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.91□□□□□ -1.78
NUP98P52948 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NUP98P52948 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
NUP98P52948 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.91□□□□□ -1.78
NUP98P52948 MTCO1P7-201ENST00000419523 1542 ntBASIC3.91□□□□□ -1.78
NUP98P52948 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NUP98P52948 OR5BR1P-201ENST00000524992 1330 ntBASIC3.91□□□□□ -1.78
NUP98P52948 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NUP98P52948 AC104297.1-201ENST00000393779 870 ntBASIC3.91□□□□□ -1.78
NUP98P52948 RNU2-22P-201ENST00000411266 212 ntBASIC3.91□□□□□ -1.78
NUP98P52948 ISCA1P2-201ENST00000438679 421 ntBASIC3.91□□□□□ -1.78
NUP98P52948 AC009263.1-201ENST00000441193 1239 ntBASIC3.91□□□□□ -1.78
NUP98P52948 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.91□□□□□ -1.78
NUP98P52948 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.91□□□□□ -1.78
NUP98P52948 SEPT7P3-201ENST00000455017 621 ntBASIC3.91□□□□□ -1.78
NUP98P52948 AL136097.1-201ENST00000456945 913 ntBASIC3.91□□□□□ -1.78
NUP98P52948 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.91□□□□□ -1.78
NUP98P52948 SNORA70.19-201ENST00000516717 90 ntBASIC3.91□□□□□ -1.78
NUP98P52948 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.91□□□□□ -1.78
NUP98P52948 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.91□□□□□ -1.78
NUP98P52948 BMS1P21-201ENST00000634565 365 ntBASIC3.91□□□□□ -1.78
NUP98P52948 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
NUP98P52948 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.78
NUP98P52948 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NUP98P52948 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NUP98P52948 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NUP98P52948 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.9□□□□□ -1.79
NUP98P52948 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.9□□□□□ -1.79
NUP98P52948 RN7SKP56-201ENST00000410513 331 ntBASIC3.9□□□□□ -1.79
NUP98P52948 RNU6-55P-201ENST00000411092 107 ntBASIC3.9□□□□□ -1.79
NUP98P52948 RNU6-954P-201ENST00000411355 107 ntBASIC3.9□□□□□ -1.79
NUP98P52948 BX679664.1-201ENST00000434429 253 ntBASIC3.9□□□□□ -1.79
NUP98P52948 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.9□□□□□ -1.79
NUP98P52948 RPS4XP22-201ENST00000480755 780 ntBASIC3.9□□□□□ -1.79
NUP98P52948 AC069306.1-201ENST00000507006 843 ntBASIC3.9□□□□□ -1.79
NUP98P52948 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.9□□□□□ -1.79
NUP98P52948 AC022080.3-201ENST00000544433 482 ntBASIC3.9□□□□□ -1.79
NUP98P52948 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.9□□□□□ -1.79
NUP98P52948 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.9□□□□□ -1.79
NUP98P52948 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.9□□□□□ -1.79
NUP98P52948 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NUP98P52948 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.9□□□□□ -1.79
NUP98P52948 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.89□□□□□ -1.79
NUP98P52948 AL451142.2-201ENST00000429076 2090 ntBASIC3.89□□□□□ -1.79
NUP98P52948 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.89□□□□□ -1.79
NUP98P52948 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
NUP98P52948 ANKRD36P1-201ENST00000344424 659 ntBASIC3.89□□□□□ -1.79
NUP98P52948 GTF3AP2-201ENST00000557014 266 ntBASIC3.89□□□□□ -1.79
NUP98P52948 AL034351.1-201ENST00000605288 668 ntBASIC3.89□□□□□ -1.79
NUP98P52948 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NUP98P52948 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.89□□□□□ -1.79
NUP98P52948 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.89□□□□□ -1.79
NUP98P52948 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
NUP98P52948 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
NUP98P52948 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC3.88□□□□□ -1.79
NUP98P52948 RPS24P13-201ENST00000442520 397 ntBASIC3.88□□□□□ -1.79
NUP98P52948 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
NUP98P52948 OR2A20P-203ENST00000498397 1268 ntBASIC3.88□□□□□ -1.79
NUP98P52948 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NUP98P52948 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.88□□□□□ -1.79
NUP98P52948 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.88□□□□□ -1.79
NUP98P52948 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NUP98P52948 CYCSP41-201ENST00000616920 296 ntBASIC3.88□□□□□ -1.79
NUP98P52948 SCARNA15.3-201ENST00000626315 122 ntBASIC3.88□□□□□ -1.79
NUP98P52948 SCARNA4.1-201ENST00000628597 123 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms