Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NEK3P51956 CKS1BP5-201ENST00000434172 273 ntBASIC4.94□□□□□ -1.62
NEK3P51956 USP9YP35-201ENST00000435696 412 ntBASIC4.94□□□□□ -1.62
NEK3P51956 AL354941.1-201ENST00000438600 464 ntBASIC4.94□□□□□ -1.62
NEK3P51956 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.94□□□□□ -1.62
NEK3P51956 OR1H1P-201ENST00000448731 937 ntBASIC4.94□□□□□ -1.62
NEK3P51956 SNORD108-201ENST00000459332 71 ntBASIC4.94□□□□□ -1.62
NEK3P51956 AC097493.1-201ENST00000463958 372 ntBASIC4.94□□□□□ -1.62
NEK3P51956 AC007686.1-201ENST00000488511 463 ntBASIC4.94□□□□□ -1.62
NEK3P51956 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.94□□□□□ -1.62
NEK3P51956 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.94□□□□□ -1.62
NEK3P51956 RNU6-1129P-201ENST00000515964 104 ntBASIC4.94□□□□□ -1.62
NEK3P51956 RNY4P37-201ENST00000516225 96 ntBASIC4.94□□□□□ -1.62
NEK3P51956 RN7SKP116-201ENST00000516902 319 ntBASIC4.94□□□□□ -1.62
NEK3P51956 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.94□□□□□ -1.62
NEK3P51956 AP003385.6-201ENST00000531603 374 ntBASIC4.94□□□□□ -1.62
NEK3P51956 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.94□□□□□ -1.62
NEK3P51956 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NEK3P51956 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.94□□□□□ -1.62
NEK3P51956 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.94□□□□□ -1.62
NEK3P51956 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.94□□□□□ -1.62
NEK3P51956 MIR5186-201ENST00000577504 120 ntBASIC4.94□□□□□ -1.62
NEK3P51956 AC091042.1-201ENST00000579213 173 ntBASIC4.94□□□□□ -1.62
NEK3P51956 MIR4999-201ENST00000585029 91 ntBASIC4.94□□□□□ -1.62
NEK3P51956 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.94□□□□□ -1.62
NEK3P51956 AL512782.1-201ENST00000603093 364 ntBASIC4.94□□□□□ -1.62
NEK3P51956 AC025588.3-201ENST00000604182 274 ntBASIC4.94□□□□□ -1.62
NEK3P51956 AC073968.1-201ENST00000618594 637 ntBASIC4.94□□□□□ -1.62
NEK3P51956 AC131159.1-201ENST00000621854 213 ntBASIC4.94□□□□□ -1.62
NEK3P51956 AC006065.5-201ENST00000623427 349 ntBASIC4.94□□□□□ -1.62
NEK3P51956 AC231657.1-201ENST00000624313 397 ntBASIC4.94□□□□□ -1.62
NEK3P51956 CR381572.2-201ENST00000624852 397 ntBASIC4.94□□□□□ -1.62
NEK3P51956 OR4G11P-202ENST00000642116 1414 ntBASIC4.94□□□□□ -1.62
NEK3P51956 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NEK3P51956 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.93□□□□□ -1.62
NEK3P51956 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
NEK3P51956 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NEK3P51956 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NEK3P51956 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
NEK3P51956 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.93□□□□□ -1.62
NEK3P51956 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.93□□□□□ -1.62
NEK3P51956 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NEK3P51956 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
NEK3P51956 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.93□□□□□ -1.62
NEK3P51956 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.93□□□□□ -1.62
NEK3P51956 RNU1-83P-201ENST00000363426 164 ntBASIC4.93□□□□□ -1.62
NEK3P51956 RNU6-339P-201ENST00000384310 107 ntBASIC4.93□□□□□ -1.62
NEK3P51956 RPL23AP29-201ENST00000397284 453 ntBASIC4.93□□□□□ -1.62
NEK3P51956 MTND4LP20-201ENST00000402379 270 ntBASIC4.93□□□□□ -1.62
NEK3P51956 AL049697.2-201ENST00000403708 294 ntBASIC4.93□□□□□ -1.62
NEK3P51956 U3.35-201ENST00000408405 208 ntBASIC4.93□□□□□ -1.62
NEK3P51956 FABP7P1-201ENST00000424004 391 ntBASIC4.93□□□□□ -1.62
NEK3P51956 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.93□□□□□ -1.62
NEK3P51956 AL035410.1-201ENST00000427409 427 ntBASIC4.93□□□□□ -1.62
NEK3P51956 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.93□□□□□ -1.62
NEK3P51956 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.93□□□□□ -1.62
NEK3P51956 AURKAPS2-201ENST00000454983 333 ntBASIC4.93□□□□□ -1.62
NEK3P51956 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.93□□□□□ -1.62
NEK3P51956 ATG12P2-201ENST00000456830 416 ntBASIC4.93□□□□□ -1.62
NEK3P51956 RPS29P22-201ENST00000472363 168 ntBASIC4.93□□□□□ -1.62
NEK3P51956 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NEK3P51956 AC108078.3-201ENST00000502633 489 ntBASIC4.93□□□□□ -1.62
NEK3P51956 MTCYBP17-201ENST00000503579 789 ntBASIC4.93□□□□□ -1.62
NEK3P51956 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.93□□□□□ -1.62
NEK3P51956 ATP1B1P1-201ENST00000509767 915 ntBASIC4.93□□□□□ -1.62
NEK3P51956 MTND1P22-201ENST00000510572 951 ntBASIC4.93□□□□□ -1.62
NEK3P51956 OR7H2P-201ENST00000513483 306 ntBASIC4.93□□□□□ -1.62
NEK3P51956 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.93□□□□□ -1.62
NEK3P51956 AC104986.1-201ENST00000517978 436 ntBASIC4.93□□□□□ -1.62
NEK3P51956 MTND2P38-201ENST00000522536 667 ntBASIC4.93□□□□□ -1.62
NEK3P51956 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NEK3P51956 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
NEK3P51956 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.93□□□□□ -1.62
NEK3P51956 AC090888.2-201ENST00000559765 1144 ntBASIC4.93□□□□□ -1.62
NEK3P51956 MIR4270-201ENST00000581799 70 ntBASIC4.93□□□□□ -1.62
NEK3P51956 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.93□□□□□ -1.62
NEK3P51956 BNIP3P11-201ENST00000603878 563 ntBASIC4.93□□□□□ -1.62
NEK3P51956 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.93□□□□□ -1.62
NEK3P51956 AL391358.1-201ENST00000605342 190 ntBASIC4.93□□□□□ -1.62
NEK3P51956 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.93□□□□□ -1.62
NEK3P51956 AC120349.3-201ENST00000624377 529 ntBASIC4.93□□□□□ -1.62
NEK3P51956 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.93□□□□□ -1.62
NEK3P51956 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.93□□□□□ -1.62
NEK3P51956 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
NEK3P51956 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NEK3P51956 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NEK3P51956 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.93□□□□□ -1.62
NEK3P51956 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NEK3P51956 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NEK3P51956 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NEK3P51956 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
NEK3P51956 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.92□□□□□ -1.62
NEK3P51956 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NEK3P51956 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
NEK3P51956 NUP58P1-201ENST00000502546 1738 ntBASIC4.92□□□□□ -1.62
NEK3P51956 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
NEK3P51956 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NEK3P51956 MTND5P24-201ENST00000438892 1767 ntBASIC4.92□□□□□ -1.62
NEK3P51956 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NEK3P51956 SNORA4.1-201ENST00000364263 144 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms