Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.36□□□□□ -1.87
LHX2P50458 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.36□□□□□ -1.87
LHX2P50458 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LHX2P50458 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
LHX2P50458 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
LHX2P50458 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.36□□□□□ -1.87
LHX2P50458 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LHX2P50458 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.35□□□□□ -1.87
LHX2P50458 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
LHX2P50458 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.35□□□□□ -1.87
LHX2P50458 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LHX2P50458 BDP1P-201ENST00000582658 1990 ntBASIC3.35□□□□□ -1.87
LHX2P50458 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LHX2P50458 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LHX2P50458 RNU6-185P-201ENST00000384421 107 ntBASIC3.35□□□□□ -1.87
LHX2P50458 MIR23B-201ENST00000384832 97 ntBASIC3.35□□□□□ -1.87
LHX2P50458 MIR200C-201ENST00000384980 68 ntBASIC3.35□□□□□ -1.87
LHX2P50458 RNA5SP424-201ENST00000390988 115 ntBASIC3.35□□□□□ -1.87
LHX2P50458 AC105402.1-201ENST00000413336 545 ntBASIC3.35□□□□□ -1.87
LHX2P50458 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.35□□□□□ -1.87
LHX2P50458 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.35□□□□□ -1.87
LHX2P50458 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.35□□□□□ -1.87
LHX2P50458 BMS1P19-201ENST00000433925 393 ntBASIC3.35□□□□□ -1.87
LHX2P50458 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.35□□□□□ -1.87
LHX2P50458 AC006480.1-201ENST00000449887 378 ntBASIC3.35□□□□□ -1.87
LHX2P50458 HMGB1P26-201ENST00000452520 628 ntBASIC3.35□□□□□ -1.87
LHX2P50458 AC098824.1-201ENST00000453565 980 ntBASIC3.35□□□□□ -1.87
LHX2P50458 NIPA2P2-201ENST00000496376 1083 ntBASIC3.35□□□□□ -1.87
LHX2P50458 AC068305.1-201ENST00000497406 726 ntBASIC3.35□□□□□ -1.87
LHX2P50458 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.35□□□□□ -1.87
LHX2P50458 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.35□□□□□ -1.87
LHX2P50458 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.35□□□□□ -1.87
LHX2P50458 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.35□□□□□ -1.87
LHX2P50458 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.35□□□□□ -1.87
LHX2P50458 AC026403.1-201ENST00000518938 295 ntBASIC3.35□□□□□ -1.87
LHX2P50458 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.35□□□□□ -1.87
LHX2P50458 SUMO2P20-201ENST00000520803 283 ntBASIC3.35□□□□□ -1.87
LHX2P50458 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LHX2P50458 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.35□□□□□ -1.87
LHX2P50458 GTF2IP22-201ENST00000554443 182 ntBASIC3.35□□□□□ -1.87
LHX2P50458 AC006960.3-201ENST00000561845 705 ntBASIC3.35□□□□□ -1.87
LHX2P50458 AGGF1P8-201ENST00000562979 1000 ntBASIC3.35□□□□□ -1.87
LHX2P50458 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.35□□□□□ -1.87
LHX2P50458 TMF1P1-201ENST00000576058 373 ntBASIC3.35□□□□□ -1.87
LHX2P50458 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.35□□□□□ -1.87
LHX2P50458 MIR4444-1-201ENST00000581696 74 ntBASIC3.35□□□□□ -1.87
LHX2P50458 MIR4444-2-201ENST00000584390 74 ntBASIC3.35□□□□□ -1.87
LHX2P50458 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LHX2P50458 AL392048.1-201ENST00000613946 534 ntBASIC3.35□□□□□ -1.87
LHX2P50458 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.35□□□□□ -1.87
LHX2P50458 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.35□□□□□ -1.87
LHX2P50458 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.35□□□□□ -1.87
LHX2P50458 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
LHX2P50458 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LHX2P50458 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LHX2P50458 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.35□□□□□ -1.87
LHX2P50458 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
LHX2P50458 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
LHX2P50458 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LHX2P50458 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LHX2P50458 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LHX2P50458 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LHX2P50458 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
LHX2P50458 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.34□□□□□ -1.87
LHX2P50458 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LHX2P50458 SYF2P2-201ENST00000417620 583 ntBASIC3.34□□□□□ -1.87
LHX2P50458 MTCO3P4-201ENST00000419236 787 ntBASIC3.34□□□□□ -1.87
LHX2P50458 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LHX2P50458 AL389915.1-201ENST00000422463 466 ntBASIC3.34□□□□□ -1.87
LHX2P50458 UBE2D3P3-201ENST00000426992 425 ntBASIC3.34□□□□□ -1.87
LHX2P50458 HIGD1AP12-201ENST00000427832 281 ntBASIC3.34□□□□□ -1.87
LHX2P50458 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.34□□□□□ -1.87
LHX2P50458 MTCO3P21-201ENST00000430791 643 ntBASIC3.34□□□□□ -1.87
LHX2P50458 AL035458.1-201ENST00000433096 585 ntBASIC3.34□□□□□ -1.87
LHX2P50458 AL512661.1-201ENST00000434586 1253 ntBASIC3.34□□□□□ -1.87
LHX2P50458 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LHX2P50458 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.34□□□□□ -1.87
LHX2P50458 RPS27P5-201ENST00000444247 244 ntBASIC3.34□□□□□ -1.87
LHX2P50458 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.34□□□□□ -1.87
LHX2P50458 HMGB3P21-201ENST00000452483 547 ntBASIC3.34□□□□□ -1.87
LHX2P50458 AC022034.3-201ENST00000471393 478 ntBASIC3.34□□□□□ -1.87
LHX2P50458 TRBV12-2-201ENST00000489763 344 ntBASIC3.34□□□□□ -1.87
LHX2P50458 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.34□□□□□ -1.87
LHX2P50458 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.34□□□□□ -1.87
LHX2P50458 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.34□□□□□ -1.87
LHX2P50458 SNORA31.13-201ENST00000516624 135 ntBASIC3.34□□□□□ -1.87
LHX2P50458 OR7E13P-201ENST00000526052 910 ntBASIC3.34□□□□□ -1.87
LHX2P50458 AC113192.3-201ENST00000529152 742 ntBASIC3.34□□□□□ -1.87
LHX2P50458 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LHX2P50458 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.34□□□□□ -1.87
LHX2P50458 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.34□□□□□ -1.87
LHX2P50458 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.34□□□□□ -1.87
LHX2P50458 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LHX2P50458 SNORA51-201ENST00000606420 132 ntBASIC3.34□□□□□ -1.87
LHX2P50458 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.34□□□□□ -1.87
LHX2P50458 AL109620.1-201ENST00000618738 1197 ntBASIC3.34□□□□□ -1.87
LHX2P50458 AC253576.2-201ENST00000618815 580 ntBASIC3.34□□□□□ -1.87
LHX2P50458 AC006249.1-201ENST00000621223 471 ntBASIC3.34□□□□□ -1.87
LHX2P50458 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.34□□□□□ -1.87
LHX2P50458 AC103798.2-201ENST00000624292 632 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms