Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AL357559.1-201ENST00000622228 274 ntBASIC3.16□□□□□ -1.9
SRP9P49458 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.16□□□□□ -1.9
SRP9P49458 AC145207.9-201ENST00000623802 325 ntBASIC3.16□□□□□ -1.9
SRP9P49458 AC034229.5-201ENST00000624258 185 ntBASIC3.16□□□□□ -1.9
SRP9P49458 AP000553.6-201ENST00000641242 118 ntBASIC3.16□□□□□ -1.9
SRP9P49458 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SRP9P49458 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.16□□□□□ -1.9
SRP9P49458 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SRP9P49458 AC118273.1-201ENST00000525324 3006 ntBASIC3.16□□□□□ -1.9
SRP9P49458 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.16□□□□□ -1.9
SRP9P49458 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SRP9P49458 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.16□□□□□ -1.9
SRP9P49458 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SRP9P49458 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SRP9P49458 SNORA31-201ENST00000362607 130 ntBASIC3.15□□□□□ -1.91
SRP9P49458 AC025750.1-201ENST00000399891 379 ntBASIC3.15□□□□□ -1.91
SRP9P49458 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SRP9P49458 AL035246.1-201ENST00000433554 1255 ntBASIC3.15□□□□□ -1.91
SRP9P49458 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.15□□□□□ -1.91
SRP9P49458 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.15□□□□□ -1.91
SRP9P49458 AL359073.1-201ENST00000448036 403 ntBASIC3.15□□□□□ -1.91
SRP9P49458 AC087312.1-201ENST00000471411 480 ntBASIC3.15□□□□□ -1.91
SRP9P49458 AC084357.1-201ENST00000473404 255 ntBASIC3.15□□□□□ -1.91
SRP9P49458 HMGB3P14-201ENST00000494195 599 ntBASIC3.15□□□□□ -1.91
SRP9P49458 AC021146.5-201ENST00000503544 545 ntBASIC3.15□□□□□ -1.91
SRP9P49458 HMGB3P15-201ENST00000507326 574 ntBASIC3.15□□□□□ -1.91
SRP9P49458 MTND4LP22-201ENST00000508209 276 ntBASIC3.15□□□□□ -1.91
SRP9P49458 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SRP9P49458 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.15□□□□□ -1.91
SRP9P49458 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SRP9P49458 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.15□□□□□ -1.91
SRP9P49458 MTCO1P49-201ENST00000523429 802 ntBASIC3.15□□□□□ -1.91
SRP9P49458 OR7E13P-201ENST00000526052 910 ntBASIC3.15□□□□□ -1.91
SRP9P49458 OR4H12P-201ENST00000556269 907 ntBASIC3.15□□□□□ -1.91
SRP9P49458 TRAV15-201ENST00000556680 249 ntBASIC3.15□□□□□ -1.91
SRP9P49458 AC005951.1-201ENST00000576706 485 ntBASIC3.15□□□□□ -1.91
SRP9P49458 BNIP3P38-201ENST00000601117 544 ntBASIC3.15□□□□□ -1.91
SRP9P49458 LLPHP1-201ENST00000603571 367 ntBASIC3.15□□□□□ -1.91
SRP9P49458 AC112230.1-201ENST00000604342 547 ntBASIC3.15□□□□□ -1.91
SRP9P49458 AC034236.3-201ENST00000605999 461 ntBASIC3.15□□□□□ -1.91
SRP9P49458 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
SRP9P49458 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SRP9P49458 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SRP9P49458 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SRP9P49458 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SRP9P49458 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SRP9P49458 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SRP9P49458 AC004972.1-201ENST00000623934 2209 ntBASIC3.14□□□□□ -1.91
SRP9P49458 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SRP9P49458 RNA5SP189-201ENST00000364920 115 ntBASIC3.14□□□□□ -1.91
SRP9P49458 RPL36AP36-201ENST00000418616 301 ntBASIC3.14□□□□□ -1.91
SRP9P49458 RRM2P4-201ENST00000441721 562 ntBASIC3.14□□□□□ -1.91
SRP9P49458 NOTCH2P1-201ENST00000443481 624 ntBASIC3.14□□□□□ -1.91
SRP9P49458 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SRP9P49458 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.14□□□□□ -1.91
SRP9P49458 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
SRP9P49458 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.14□□□□□ -1.91
SRP9P49458 OR5H4P-201ENST00000510851 923 ntBASIC3.14□□□□□ -1.91
SRP9P49458 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.14□□□□□ -1.91
SRP9P49458 RNU1-45P-201ENST00000517191 141 ntBASIC3.14□□□□□ -1.91
SRP9P49458 PAICSP4-201ENST00000517543 1253 ntBASIC3.14□□□□□ -1.91
SRP9P49458 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.14□□□□□ -1.91
SRP9P49458 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.14□□□□□ -1.91
SRP9P49458 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.14□□□□□ -1.91
SRP9P49458 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.14□□□□□ -1.91
SRP9P49458 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.14□□□□□ -1.91
SRP9P49458 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
SRP9P49458 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.14□□□□□ -1.91
SRP9P49458 AC010735.1-201ENST00000567305 1026 ntBASIC3.14□□□□□ -1.91
SRP9P49458 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SRP9P49458 AC027281.1-201ENST00000574178 758 ntBASIC3.14□□□□□ -1.91
SRP9P49458 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.14□□□□□ -1.91
SRP9P49458 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.14□□□□□ -1.91
SRP9P49458 AC005972.3-201ENST00000606304 481 ntBASIC3.14□□□□□ -1.91
SRP9P49458 AL356863.1-201ENST00000623378 1080 ntBASIC3.14□□□□□ -1.91
SRP9P49458 AL732372.2-225ENST00000642124 456 ntBASIC3.14□□□□□ -1.91
SRP9P49458 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SRP9P49458 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.14□□□□□ -1.91
SRP9P49458 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SRP9P49458 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SRP9P49458 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SRP9P49458 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SRP9P49458 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SRP9P49458 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SRP9P49458 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SRP9P49458 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SRP9P49458 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
SRP9P49458 RNA5SP295-201ENST00000362655 121 ntBASIC3.13□□□□□ -1.91
SRP9P49458 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SRP9P49458 HMGB3P18-201ENST00000406327 590 ntBASIC3.13□□□□□ -1.91
SRP9P49458 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SRP9P49458 OSTCP5-201ENST00000425293 453 ntBASIC3.13□□□□□ -1.91
SRP9P49458 MRPS18BP2-201ENST00000434310 759 ntBASIC3.13□□□□□ -1.91
SRP9P49458 RPL7P59-201ENST00000447700 943 ntBASIC3.13□□□□□ -1.91
SRP9P49458 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SRP9P49458 AC022034.3-201ENST00000471393 478 ntBASIC3.13□□□□□ -1.91
SRP9P49458 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.13□□□□□ -1.91
SRP9P49458 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.13□□□□□ -1.91
SRP9P49458 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.13□□□□□ -1.91
SRP9P49458 AP006245.1-201ENST00000522549 120 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms