Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CDX1P47902 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.74□□□□□ -1.81
CDX1P47902 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.74□□□□□ -1.81
CDX1P47902 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CDX1P47902 AC109315.1-201ENST00000584143 1347 ntBASIC3.74□□□□□ -1.81
CDX1P47902 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDX1P47902 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDX1P47902 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
CDX1P47902 RNVU1-6-201ENST00000364688 164 ntBASIC3.74□□□□□ -1.81
CDX1P47902 RNU6-636P-201ENST00000384598 107 ntBASIC3.74□□□□□ -1.81
CDX1P47902 MIR192-201ENST00000384915 110 ntBASIC3.74□□□□□ -1.81
CDX1P47902 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.74□□□□□ -1.81
CDX1P47902 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CDX1P47902 OR51B3P-201ENST00000412287 913 ntBASIC3.74□□□□□ -1.81
CDX1P47902 LUZP4P1-201ENST00000415420 344 ntBASIC3.74□□□□□ -1.81
CDX1P47902 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.74□□□□□ -1.81
CDX1P47902 OFD1P18Y-201ENST00000420889 959 ntBASIC3.74□□□□□ -1.81
CDX1P47902 AC245028.1-201ENST00000423259 256 ntBASIC3.74□□□□□ -1.81
CDX1P47902 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.74□□□□□ -1.81
CDX1P47902 MTND2P5-201ENST00000432656 1006 ntBASIC3.74□□□□□ -1.81
CDX1P47902 AL035246.1-201ENST00000433554 1255 ntBASIC3.74□□□□□ -1.81
CDX1P47902 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.74□□□□□ -1.81
CDX1P47902 AC005154.2-201ENST00000438110 379 ntBASIC3.74□□□□□ -1.81
CDX1P47902 AC016831.4-201ENST00000438302 307 ntBASIC3.74□□□□□ -1.81
CDX1P47902 AC004938.1-201ENST00000438468 308 ntBASIC3.74□□□□□ -1.81
CDX1P47902 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.74□□□□□ -1.81
CDX1P47902 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.74□□□□□ -1.81
CDX1P47902 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.74□□□□□ -1.81
CDX1P47902 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.74□□□□□ -1.81
CDX1P47902 AC106872.2-201ENST00000494303 480 ntBASIC3.74□□□□□ -1.81
CDX1P47902 AC010460.2-201ENST00000509054 677 ntBASIC3.74□□□□□ -1.81
CDX1P47902 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.74□□□□□ -1.81
CDX1P47902 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.74□□□□□ -1.81
CDX1P47902 AC015795.1-201ENST00000513669 327 ntBASIC3.74□□□□□ -1.81
CDX1P47902 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.74□□□□□ -1.81
CDX1P47902 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.74□□□□□ -1.81
CDX1P47902 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.74□□□□□ -1.81
CDX1P47902 OR4A12P-201ENST00000530847 918 ntBASIC3.74□□□□□ -1.81
CDX1P47902 AC008127.2-201ENST00000549925 1075 ntBASIC3.74□□□□□ -1.81
CDX1P47902 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.74□□□□□ -1.81
CDX1P47902 AC133555.2-201ENST00000550213 292 ntBASIC3.74□□□□□ -1.81
CDX1P47902 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.74□□□□□ -1.81
CDX1P47902 AL049839.1-201ENST00000556151 657 ntBASIC3.74□□□□□ -1.81
CDX1P47902 AC087477.6-201ENST00000559595 843 ntBASIC3.74□□□□□ -1.81
CDX1P47902 AL132657.2-201ENST00000564417 358 ntBASIC3.74□□□□□ -1.81
CDX1P47902 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.74□□□□□ -1.81
CDX1P47902 AP001269.3-201ENST00000588718 329 ntBASIC3.74□□□□□ -1.81
CDX1P47902 BNIP3P26-201ENST00000600827 554 ntBASIC3.74□□□□□ -1.81
CDX1P47902 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.74□□□□□ -1.81
CDX1P47902 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.74□□□□□ -1.81
CDX1P47902 MTND3P19-201ENST00000603825 345 ntBASIC3.74□□□□□ -1.81
CDX1P47902 AC098935.2-201ENST00000604222 466 ntBASIC3.74□□□□□ -1.81
CDX1P47902 HMGB1P50-201ENST00000605814 607 ntBASIC3.74□□□□□ -1.81
CDX1P47902 AC023158.2-201ENST00000614876 543 ntBASIC3.74□□□□□ -1.81
CDX1P47902 AC090116.1-201ENST00000615679 446 ntBASIC3.74□□□□□ -1.81
CDX1P47902 AC231759.1-201ENST00000616455 597 ntBASIC3.74□□□□□ -1.81
CDX1P47902 AC233309.1-201ENST00000619522 751 ntBASIC3.74□□□□□ -1.81
CDX1P47902 AC091046.2-201ENST00000620775 665 ntBASIC3.74□□□□□ -1.81
CDX1P47902 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.74□□□□□ -1.81
CDX1P47902 AC092184.1-201ENST00000625042 715 ntBASIC3.74□□□□□ -1.81
CDX1P47902 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CDX1P47902 AC090897.3-201ENST00000636973 1157 ntBASIC3.74□□□□□ -1.81
CDX1P47902 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CDX1P47902 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.74□□□□□ -1.81
CDX1P47902 AC097504.1-201ENST00000515103 2415 ntBASIC3.74□□□□□ -1.81
CDX1P47902 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDX1P47902 PNPT1P2-201ENST00000456768 2050 ntBASIC3.74□□□□□ -1.81
CDX1P47902 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.74□□□□□ -1.81
CDX1P47902 AC026951.1-201ENST00000559530 2459 ntBASIC3.73□□□□□ -1.81
CDX1P47902 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.73□□□□□ -1.81
CDX1P47902 ZFRP1-201ENST00000457579 2970 ntBASIC3.73□□□□□ -1.81
CDX1P47902 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDX1P47902 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDX1P47902 AC079741.1-201ENST00000321498 212 ntBASIC3.73□□□□□ -1.81
CDX1P47902 RNA5SP191-201ENST00000362585 102 ntBASIC3.73□□□□□ -1.81
CDX1P47902 RN7SKP115-201ENST00000363177 317 ntBASIC3.73□□□□□ -1.81
CDX1P47902 RN7SKP44-201ENST00000363602 316 ntBASIC3.73□□□□□ -1.81
CDX1P47902 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDX1P47902 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CDX1P47902 SNORA51.6-201ENST00000384151 125 ntBASIC3.73□□□□□ -1.81
CDX1P47902 U3.30-201ENST00000391308 210 ntBASIC3.73□□□□□ -1.81
CDX1P47902 ERHP2-201ENST00000402323 299 ntBASIC3.73□□□□□ -1.81
CDX1P47902 RPS16P5-201ENST00000406501 404 ntBASIC3.73□□□□□ -1.81
CDX1P47902 NRBF2P2-201ENST00000413087 861 ntBASIC3.73□□□□□ -1.81
CDX1P47902 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.73□□□□□ -1.81
CDX1P47902 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.73□□□□□ -1.81
CDX1P47902 HSFY1P1-201ENST00000423928 1178 ntBASIC3.73□□□□□ -1.81
CDX1P47902 AL732292.1-201ENST00000426692 226 ntBASIC3.73□□□□□ -1.81
CDX1P47902 USP9YP31-201ENST00000431405 881 ntBASIC3.73□□□□□ -1.81
CDX1P47902 KCTD10P1-201ENST00000434203 625 ntBASIC3.73□□□□□ -1.81
CDX1P47902 AL359265.2-201ENST00000434367 631 ntBASIC3.73□□□□□ -1.81
CDX1P47902 RPS17P8-201ENST00000434525 335 ntBASIC3.73□□□□□ -1.81
CDX1P47902 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDX1P47902 USP9YP7-201ENST00000436723 430 ntBASIC3.73□□□□□ -1.81
CDX1P47902 HLA-N-201ENST00000437516 135 ntBASIC3.73□□□□□ -1.81
CDX1P47902 RPL23AP76-201ENST00000441860 458 ntBASIC3.73□□□□□ -1.81
CDX1P47902 AC004022.1-201ENST00000447766 1066 ntBASIC3.73□□□□□ -1.81
CDX1P47902 USP9YP32-201ENST00000452432 430 ntBASIC3.73□□□□□ -1.81
CDX1P47902 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.73□□□□□ -1.81
CDX1P47902 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms