Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 LLPHP1-201ENST00000603571 367 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 AC080013.3-201ENST00000606839 578 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 AL392048.1-201ENST00000613946 534 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.74□□□□□ -1.81
NKX2-1P43699 AC007490.1-201ENST00000624321 703 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.74□□□□□ -1.81
NKX2-1P43699 CGA-206ENST00000630630 832 ntTSL 2 BASIC3.74□□□□□ -1.81
NKX2-1P43699 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.74□□□□□ -1.81
NKX2-1P43699 AC103706.2-201ENST00000638080 240 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.74□□□□□ -1.81
NKX2-1P43699 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
NKX2-1P43699 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
NKX2-1P43699 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
NKX2-1P43699 AC011266.1-201ENST00000624119 3569 ntBASIC3.74□□□□□ -1.81
NKX2-1P43699 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.74□□□□□ -1.81
NKX2-1P43699 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
NKX2-1P43699 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NKX2-1P43699 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NKX2-1P43699 NMD3P1-201ENST00000439704 1488 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 AC109315.1-201ENST00000584143 1347 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 AC018529.3-201ENST00000624212 2254 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NKX2-1P43699 RNU5D-1-201ENST00000363299 116 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 RHOT1P2-201ENST00000366423 333 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
NKX2-1P43699 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
NKX2-1P43699 RNU6-1279P-201ENST00000383917 103 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 RNU6-356P-201ENST00000384140 107 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 MIR153-1-201ENST00000384914 90 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 AL161449.1-201ENST00000414531 1199 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 AC062016.2-201ENST00000420950 676 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 RPL7P53-201ENST00000421245 739 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 AL355433.1-201ENST00000422804 300 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 MTND4P20-201ENST00000424125 869 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.73□□□□□ -1.81
NKX2-1P43699 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.73□□□□□ -1.81
NKX2-1P43699 PSMA2P3-201ENST00000429685 675 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.73□□□□□ -1.81
NKX2-1P43699 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.73□□□□□ -1.81
NKX2-1P43699 HLA-N-201ENST00000437516 135 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 MTND2P20-201ENST00000440805 661 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 FGF7P5-201ENST00000441829 291 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 RPL23AP76-201ENST00000441860 458 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 AC108463.1-201ENST00000450258 347 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 NDUFS5P3-201ENST00000450668 321 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 NECAP1P2-201ENST00000455668 727 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.73□□□□□ -1.81
NKX2-1P43699 RPS3AP22-201ENST00000488297 769 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.73□□□□□ -1.81
NKX2-1P43699 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.73□□□□□ -1.81
NKX2-1P43699 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.73□□□□□ -1.81
NKX2-1P43699 AC091868.1-201ENST00000508746 304 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 HMGB3P13-201ENST00000511263 607 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC3.73□□□□□ -1.81
NKX2-1P43699 AC109445.1-201ENST00000512356 383 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
NKX2-1P43699 MRPS33P3-201ENST00000513456 322 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.73□□□□□ -1.81
NKX2-1P43699 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC3.73□□□□□ -1.81
NKX2-1P43699 Y_RNA.688-201ENST00000516565 95 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 SCARNA21.2-201ENST00000516600 166 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.73□□□□□ -1.81
NKX2-1P43699 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.73□□□□□ -1.81
NKX2-1P43699 IGLV2-28-201ENST00000520681 304 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.73□□□□□ -1.81
NKX2-1P43699 IFITM8P-201ENST00000522529 394 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NKX2-1P43699 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC3.73□□□□□ -1.81
NKX2-1P43699 HAUS8P1-201ENST00000549005 542 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 AC125611.1-201ENST00000549563 229 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
NKX2-1P43699 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.73□□□□□ -1.81
NKX2-1P43699 HIGD1AP17-201ENST00000554576 276 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 OR11J2P-201ENST00000555298 907 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.73□□□□□ -1.81
NKX2-1P43699 CYP4A43P-201ENST00000568156 121 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 AC138915.2-201ENST00000569776 97 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC3.73□□□□□ -1.81
NKX2-1P43699 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NKX2-1P43699 VN1R82P-201ENST00000601481 356 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 AC008638.3-201ENST00000603341 463 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 AC103792.1-201ENST00000603591 919 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 MEMO1P5-201ENST00000604810 406 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.73□□□□□ -1.81
NKX2-1P43699 AP002360.3-201ENST00000607673 710 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 MIR6862-1-201ENST00000613016 70 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 MIR6862-2-201ENST00000614755 70 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 AC078883.4-201ENST00000623218 367 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC3.73□□□□□ -1.81
NKX2-1P43699 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.73□□□□□ -1.81
NKX2-1P43699 ZNRD1ASP-221ENST00000637794 1074 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
NKX2-1P43699 AC090337.1-201ENST00000579651 2074 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NKX2-1P43699 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.73□□□□□ -1.81
NKX2-1P43699 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NKX2-1P43699 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NKX2-1P43699 ZNF37BP-203ENST00000452306 1352 ntBASIC3.73□□□□□ -1.81
NKX2-1P43699 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.73□□□□□ -1.81
NKX2-1P43699 AL391684.1-202ENST00000641293 1636 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms