Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.65□□□□□ -1.51
CCNFP41002 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCNFP41002 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCNFP41002 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCNFP41002 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
CCNFP41002 AC138915.3-201ENST00000562908 1389 ntBASIC5.65□□□□□ -1.51
CCNFP41002 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCNFP41002 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCNFP41002 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCNFP41002 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
CCNFP41002 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCNFP41002 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.64□□□□□ -1.51
CCNFP41002 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCNFP41002 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCNFP41002 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.64□□□□□ -1.51
CCNFP41002 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.64□□□□□ -1.51
CCNFP41002 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCNFP41002 Y_RNA.46-201ENST00000362695 102 ntBASIC5.64□□□□□ -1.51
CCNFP41002 Y_RNA.356-201ENST00000365475 113 ntBASIC5.64□□□□□ -1.51
CCNFP41002 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.64□□□□□ -1.51
CCNFP41002 RNU2-8P-201ENST00000410727 190 ntBASIC5.64□□□□□ -1.51
CCNFP41002 AL133384.1-201ENST00000412744 351 ntBASIC5.64□□□□□ -1.51
CCNFP41002 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.64□□□□□ -1.51
CCNFP41002 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.64□□□□□ -1.51
CCNFP41002 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.64□□□□□ -1.51
CCNFP41002 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.64□□□□□ -1.51
CCNFP41002 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.64□□□□□ -1.51
CCNFP41002 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.64□□□□□ -1.51
CCNFP41002 RPL7P54-201ENST00000438336 674 ntBASIC5.64□□□□□ -1.51
CCNFP41002 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.64□□□□□ -1.51
CCNFP41002 FAM103A2P-201ENST00000444122 354 ntBASIC5.64□□□□□ -1.51
CCNFP41002 RPS26P56-201ENST00000444468 240 ntBASIC5.64□□□□□ -1.51
CCNFP41002 RPL36AP15-201ENST00000444514 266 ntBASIC5.64□□□□□ -1.51
CCNFP41002 EEF1A1P1-201ENST00000447052 739 ntBASIC5.64□□□□□ -1.51
CCNFP41002 AC132479.1-201ENST00000449160 144 ntBASIC5.64□□□□□ -1.51
CCNFP41002 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.64□□□□□ -1.51
CCNFP41002 PMCHL2-203ENST00000457791 237 ntBASIC5.64□□□□□ -1.51
CCNFP41002 AC011476.1-201ENST00000466725 307 ntBASIC5.64□□□□□ -1.51
CCNFP41002 PABPC1P3-201ENST00000469174 459 ntBASIC5.64□□□□□ -1.51
CCNFP41002 AP000893.1-201ENST00000474462 794 ntBASIC5.64□□□□□ -1.51
CCNFP41002 RN7SL809P-201ENST00000482040 297 ntBASIC5.64□□□□□ -1.51
CCNFP41002 AC079382.1-201ENST00000493346 557 ntBASIC5.64□□□□□ -1.51
CCNFP41002 NENFP3-201ENST00000503735 313 ntBASIC5.64□□□□□ -1.51
CCNFP41002 AC114781.3-201ENST00000512083 142 ntBASIC5.64□□□□□ -1.51
CCNFP41002 RNU6-714P-201ENST00000516963 103 ntBASIC5.64□□□□□ -1.51
CCNFP41002 RNA5SP230-201ENST00000517039 122 ntBASIC5.64□□□□□ -1.51
CCNFP41002 AC022616.6-201ENST00000520479 119 ntBASIC5.64□□□□□ -1.51
CCNFP41002 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.64□□□□□ -1.51
CCNFP41002 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.64□□□□□ -1.51
CCNFP41002 CENPUP1-201ENST00000526649 1202 ntBASIC5.64□□□□□ -1.51
CCNFP41002 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.64□□□□□ -1.51
CCNFP41002 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCNFP41002 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.64□□□□□ -1.51
CCNFP41002 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.64□□□□□ -1.51
CCNFP41002 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.64□□□□□ -1.51
CCNFP41002 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.64□□□□□ -1.51
CCNFP41002 CBX3P5-201ENST00000552017 521 ntBASIC5.64□□□□□ -1.51
CCNFP41002 HIF1AP1-201ENST00000553642 175 ntBASIC5.64□□□□□ -1.51
CCNFP41002 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.64□□□□□ -1.51
CCNFP41002 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.64□□□□□ -1.51
CCNFP41002 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.64□□□□□ -1.51
CCNFP41002 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.64□□□□□ -1.51
CCNFP41002 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.64□□□□□ -1.51
CCNFP41002 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.64□□□□□ -1.51
CCNFP41002 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.64□□□□□ -1.51
CCNFP41002 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.64□□□□□ -1.51
CCNFP41002 AC087045.1-201ENST00000605856 382 ntBASIC5.64□□□□□ -1.51
CCNFP41002 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.64□□□□□ -1.51
CCNFP41002 MTND1P37-201ENST00000636562 264 ntBASIC5.64□□□□□ -1.51
CCNFP41002 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.64□□□□□ -1.51
CCNFP41002 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.64□□□□□ -1.51
CCNFP41002 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCNFP41002 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.64□□□□□ -1.51
CCNFP41002 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCNFP41002 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.64□□□□□ -1.51
CCNFP41002 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.64□□□□□ -1.51
CCNFP41002 AC091305.2-201ENST00000624049 1576 ntBASIC5.63□□□□□ -1.51
CCNFP41002 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.63□□□□□ -1.51
CCNFP41002 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCNFP41002 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCNFP41002 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCNFP41002 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCNFP41002 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCNFP41002 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CCNFP41002 AC092681.1-201ENST00000297369 291 ntBASIC5.63□□□□□ -1.51
CCNFP41002 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CCNFP41002 RNA5SP435-201ENST00000364044 108 ntBASIC5.63□□□□□ -1.51
CCNFP41002 RNU6-744P-201ENST00000365557 107 ntBASIC5.63□□□□□ -1.51
CCNFP41002 RNU6-1316P-201ENST00000384242 108 ntBASIC5.63□□□□□ -1.51
CCNFP41002 MT-TD-201ENST00000387419 68 ntBASIC5.63□□□□□ -1.51
CCNFP41002 AL603766.1-201ENST00000407763 664 ntBASIC5.63□□□□□ -1.51
CCNFP41002 MRPL53P1-201ENST00000414323 319 ntBASIC5.63□□□□□ -1.51
CCNFP41002 RPL7P57-201ENST00000423238 740 ntBASIC5.63□□□□□ -1.51
CCNFP41002 RWDD4P2-201ENST00000426392 563 ntBASIC5.63□□□□□ -1.51
CCNFP41002 AC073465.2-201ENST00000440938 498 ntBASIC5.63□□□□□ -1.51
CCNFP41002 USP9YP15-201ENST00000442391 422 ntBASIC5.63□□□□□ -1.51
CCNFP41002 AP006222.1-205ENST00000450734 457 ntBASIC5.63□□□□□ -1.51
CCNFP41002 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.63□□□□□ -1.51
CCNFP41002 HLA-DPA3-207ENST00000454398 229 ntBASIC5.63□□□□□ -1.51
CCNFP41002 AC022364.2-201ENST00000457963 554 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms