Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 U8.18-201ENST00000459285 133 ntBASIC3.69□□□□□ -1.82
RORAP35398 RPL21P11-201ENST00000461458 483 ntBASIC3.69□□□□□ -1.82
RORAP35398 AC091564.1-201ENST00000464563 479 ntBASIC3.69□□□□□ -1.82
RORAP35398 ACTR3P3-201ENST00000480448 893 ntBASIC3.69□□□□□ -1.82
RORAP35398 SCARNA14-201ENST00000516903 136 ntBASIC3.69□□□□□ -1.82
RORAP35398 RNA5SP143-201ENST00000516936 115 ntBASIC3.69□□□□□ -1.82
RORAP35398 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.69□□□□□ -1.82
RORAP35398 SOD1P3-201ENST00000518682 454 ntBASIC3.69□□□□□ -1.82
RORAP35398 TRMT10BP1-201ENST00000519377 943 ntBASIC3.69□□□□□ -1.82
RORAP35398 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.69□□□□□ -1.82
RORAP35398 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.69□□□□□ -1.82
RORAP35398 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.69□□□□□ -1.82
RORAP35398 AC053481.3-201ENST00000577881 843 ntBASIC3.69□□□□□ -1.82
RORAP35398 CBX3P2-202ENST00000583365 535 ntBASIC3.69□□□□□ -1.82
RORAP35398 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RORAP35398 AC005344.1-201ENST00000613391 459 ntBASIC3.69□□□□□ -1.82
RORAP35398 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RORAP35398 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RORAP35398 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.69□□□□□ -1.82
RORAP35398 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RORAP35398 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RORAP35398 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
RORAP35398 MTND4P31-201ENST00000425607 1343 ntBASIC3.69□□□□□ -1.82
RORAP35398 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.68□□□□□ -1.82
RORAP35398 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
RORAP35398 GABPAP-201ENST00000419271 1356 ntBASIC3.68□□□□□ -1.82
RORAP35398 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RORAP35398 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
RORAP35398 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RORAP35398 ZNF602P-201ENST00000405929 924 ntBASIC3.68□□□□□ -1.82
RORAP35398 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.68□□□□□ -1.82
RORAP35398 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.68□□□□□ -1.82
RORAP35398 AC017083.1-201ENST00000428093 483 ntBASIC3.68□□□□□ -1.82
RORAP35398 ARL4AP4-201ENST00000434170 518 ntBASIC3.68□□□□□ -1.82
RORAP35398 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.68□□□□□ -1.82
RORAP35398 RPS26P40-201ENST00000435209 294 ntBASIC3.68□□□□□ -1.82
RORAP35398 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.68□□□□□ -1.82
RORAP35398 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.68□□□□□ -1.82
RORAP35398 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.68□□□□□ -1.82
RORAP35398 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.68□□□□□ -1.82
RORAP35398 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.68□□□□□ -1.82
RORAP35398 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.68□□□□□ -1.82
RORAP35398 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.68□□□□□ -1.82
RORAP35398 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.68□□□□□ -1.82
RORAP35398 PAICSP4-201ENST00000517543 1253 ntBASIC3.68□□□□□ -1.82
RORAP35398 IGKV2-36-201ENST00000519999 223 ntBASIC3.68□□□□□ -1.82
RORAP35398 AP002812.4-201ENST00000532139 286 ntBASIC3.68□□□□□ -1.82
RORAP35398 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
RORAP35398 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.68□□□□□ -1.82
RORAP35398 AP000919.1-202ENST00000581139 1264 ntBASIC3.68□□□□□ -1.82
RORAP35398 AC005242.1-201ENST00000585658 438 ntBASIC3.68□□□□□ -1.82
RORAP35398 ZNF92P3-201ENST00000596594 954 ntBASIC3.68□□□□□ -1.82
RORAP35398 SUMO2P14-201ENST00000604488 293 ntBASIC3.68□□□□□ -1.82
RORAP35398 AL392112.1-201ENST00000605115 829 ntBASIC3.68□□□□□ -1.82
RORAP35398 AC003001.2-201ENST00000616294 831 ntBASIC3.68□□□□□ -1.82
RORAP35398 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.68□□□□□ -1.82
RORAP35398 AC022079.2-201ENST00000619739 566 ntBASIC3.68□□□□□ -1.82
RORAP35398 MIR6075-201ENST00000620782 95 ntBASIC3.68□□□□□ -1.82
RORAP35398 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.68□□□□□ -1.82
RORAP35398 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
RORAP35398 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RORAP35398 GTF2H2B-203ENST00000508065 1432 ntBASIC3.68□□□□□ -1.82
RORAP35398 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.68□□□□□ -1.82
RORAP35398 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RORAP35398 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RORAP35398 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RORAP35398 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.67□□□□□ -1.82
RORAP35398 AP004289.2-201ENST00000444413 1457 ntBASIC3.67□□□□□ -1.82
RORAP35398 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
RORAP35398 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RORAP35398 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RORAP35398 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RORAP35398 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.67□□□□□ -1.82
RORAP35398 SNORA73.2-201ENST00000364946 201 ntBASIC3.67□□□□□ -1.82
RORAP35398 SNORD51.1-201ENST00000365405 77 ntBASIC3.67□□□□□ -1.82
RORAP35398 RNU6-328P-201ENST00000390887 106 ntBASIC3.67□□□□□ -1.82
RORAP35398 AL353692.2-201ENST00000407054 335 ntBASIC3.67□□□□□ -1.82
RORAP35398 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.67□□□□□ -1.82
RORAP35398 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.67□□□□□ -1.82
RORAP35398 MTND4P24-201ENST00000424002 397 ntBASIC3.67□□□□□ -1.82
RORAP35398 RPL37P1-201ENST00000432310 284 ntBASIC3.67□□□□□ -1.82
RORAP35398 GOT2P5-201ENST00000433995 546 ntBASIC3.67□□□□□ -1.82
RORAP35398 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.67□□□□□ -1.82
RORAP35398 AC096638.2-201ENST00000434965 711 ntBASIC3.67□□□□□ -1.82
RORAP35398 TPTE2P3-201ENST00000441562 1189 ntBASIC3.67□□□□□ -1.82
RORAP35398 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RORAP35398 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.67□□□□□ -1.82
RORAP35398 YWHAQP9-201ENST00000445891 512 ntBASIC3.67□□□□□ -1.82
RORAP35398 HMGN2P21-201ENST00000447764 270 ntBASIC3.67□□□□□ -1.82
RORAP35398 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RORAP35398 RPL7P15-201ENST00000461190 712 ntBASIC3.67□□□□□ -1.82
RORAP35398 RPL37P6-202ENST00000464216 403 ntBASIC3.67□□□□□ -1.82
RORAP35398 AC034236.1-201ENST00000469891 373 ntBASIC3.67□□□□□ -1.82
RORAP35398 RPL31P61-201ENST00000496160 376 ntBASIC3.67□□□□□ -1.82
RORAP35398 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.67□□□□□ -1.82
RORAP35398 AC005921.1-201ENST00000510589 286 ntBASIC3.67□□□□□ -1.82
RORAP35398 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.67□□□□□ -1.82
RORAP35398 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.67□□□□□ -1.82
RORAP35398 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.67□□□□□ -1.82
RORAP35398 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms