Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXC13P31276 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.45□□□□□ -1.7
HOXC13P31276 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.45□□□□□ -1.7
HOXC13P31276 PABPC1P7-201ENST00000413177 1513 ntBASIC4.45□□□□□ -1.7
HOXC13P31276 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXC13P31276 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC13P31276 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC13P31276 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXC13P31276 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXC13P31276 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC13P31276 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC13P31276 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXC13P31276 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC13P31276 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HOXC13P31276 RLIMP1-201ENST00000339626 1680 ntBASIC4.45□□□□□ -1.7
HOXC13P31276 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HOXC13P31276 ZNF849P-201ENST00000594711 1566 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC13P31276 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
HOXC13P31276 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC13P31276 RNA5SP175-201ENST00000364275 119 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 RNU6-761P-201ENST00000384148 107 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 SNORD65C-201ENST00000390962 71 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 SNORD66.1-201ENST00000391230 76 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC13P31276 RNU2-37P-201ENST00000410695 177 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXC13P31276 AC246680.2-201ENST00000422106 389 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 PDSS1P1-201ENST00000422953 1114 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.44□□□□□ -1.7
HOXC13P31276 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXC13P31276 AL356276.2-201ENST00000435919 558 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC13P31276 AL512326.1-201ENST00000443050 721 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HOXC13P31276 AL162151.2-201ENST00000448875 158 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXC13P31276 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.44□□□□□ -1.7
HOXC13P31276 AC098826.2-201ENST00000452011 651 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXC13P31276 RPS17P11-201ENST00000474297 293 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 AC092451.1-201ENST00000480211 153 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 AC092902.1-201ENST00000486999 259 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXC13P31276 RPL35P6-201ENST00000490024 372 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 AL132838.2-201ENST00000492041 314 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 AP002812.1-201ENST00000495378 474 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC13P31276 TMEM248P1-201ENST00000510579 951 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 TCP11X3P-202ENST00000514289 1254 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC13P31276 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC13P31276 AC124293.1-201ENST00000530034 493 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.44□□□□□ -1.7
HOXC13P31276 AC006064.5-201ENST00000541782 248 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.44□□□□□ -1.7
HOXC13P31276 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXC13P31276 AC104072.1-201ENST00000568817 668 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC13P31276 AC017100.2-201ENST00000584628 355 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC13P31276 AC008759.3-201ENST00000613300 508 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 AC009237.17-201ENST00000618111 748 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 AC039056.2-201ENST00000622261 511 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 AC006963.1-201ENST00000624003 1052 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 AC112484.5-201ENST00000624189 228 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC13P31276 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC13P31276 AC068620.4-201ENST00000636730 1182 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC13P31276 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC13P31276 AC107081.3-201ENST00000612715 2034 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC13P31276 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
HOXC13P31276 AL157700.1-201ENST00000561973 1432 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC13P31276 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HOXC13P31276 USP8P1-201ENST00000494673 3183 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 AC027290.2-201ENST00000623210 18662 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 AL133383.2-201ENST00000622958 2336 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXC13P31276 AC139713.2-215ENST00000641428 5037 ntBASIC4.44□□□□□ -1.7
HOXC13P31276 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
HOXC13P31276 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC13P31276 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HOXC13P31276 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXC13P31276 HDGFP1-201ENST00000405943 252 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 VN1R8P-201ENST00000407739 893 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 RNU6-272P-201ENST00000411028 104 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXC13P31276 RPL31P2-201ENST00000413849 377 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HOXC13P31276 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXC13P31276 EIF1P3-201ENST00000423841 334 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 RPL21P110-201ENST00000433345 446 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 RPL21P89-201ENST00000444021 467 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 MTND1P33-201ENST00000446251 917 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 AC005002.1-201ENST00000447458 540 ntBASIC4.43□□□□□ -1.7
HOXC13P31276 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXC13P31276 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms