Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC097655.1-201ENST00000635075 318 ntBASIC4.47□□□□□ -1.69
HOXC8P31273 AL590396.4-201ENST00000636779 956 ntBASIC4.47□□□□□ -1.69
HOXC8P31273 OR5BE1P-202ENST00000641168 1176 ntBASIC4.47□□□□□ -1.69
HOXC8P31273 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.47□□□□□ -1.69
HOXC8P31273 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXC8P31273 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HOXC8P31273 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC8P31273 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC8P31273 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC8P31273 MAPK10-303ENST00000641324 3959 ntBASIC4.46□□□□□ -1.69
HOXC8P31273 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HOXC8P31273 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.46□□□□□ -1.69
HOXC8P31273 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HOXC8P31273 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
HOXC8P31273 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXC8P31273 ZNF849P-201ENST00000594711 1566 ntBASIC4.46□□□□□ -1.7
HOXC8P31273 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
HOXC8P31273 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC8P31273 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HOXC8P31273 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HOXC8P31273 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.46□□□□□ -1.7
HOXC8P31273 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXC8P31273 AL603766.1-201ENST00000407763 664 ntBASIC4.46□□□□□ -1.7
HOXC8P31273 RN7SKP199-201ENST00000410325 305 ntBASIC4.46□□□□□ -1.7
HOXC8P31273 RNU6-272P-201ENST00000411028 104 ntBASIC4.46□□□□□ -1.7
HOXC8P31273 VN1R51P-201ENST00000411675 945 ntBASIC4.46□□□□□ -1.7
HOXC8P31273 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXC8P31273 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC8P31273 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXC8P31273 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC8P31273 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXC8P31273 AC008065.1-201ENST00000428525 348 ntBASIC4.46□□□□□ -1.7
HOXC8P31273 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC8P31273 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC8P31273 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXC8P31273 AC098826.2-201ENST00000452011 651 ntBASIC4.46□□□□□ -1.7
HOXC8P31273 AC008280.2-201ENST00000455473 307 ntBASIC4.46□□□□□ -1.7
HOXC8P31273 OR9M1P-201ENST00000459641 921 ntBASIC4.46□□□□□ -1.7
HOXC8P31273 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXC8P31273 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC8P31273 HMGB1P38-201ENST00000490557 577 ntBASIC4.46□□□□□ -1.7
HOXC8P31273 AC098862.1-201ENST00000504991 413 ntBASIC4.46□□□□□ -1.7
HOXC8P31273 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXC8P31273 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC8P31273 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC8P31273 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXC8P31273 AC118942.1-201ENST00000529674 1035 ntBASIC4.46□□□□□ -1.7
HOXC8P31273 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.46□□□□□ -1.7
HOXC8P31273 PTP4A1P6-201ENST00000531034 478 ntBASIC4.46□□□□□ -1.7
HOXC8P31273 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC8P31273 AC091516.1-201ENST00000549191 703 ntBASIC4.46□□□□□ -1.7
HOXC8P31273 AGGF1P5-201ENST00000567900 919 ntBASIC4.46□□□□□ -1.7
HOXC8P31273 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXC8P31273 MTATP6P24-201ENST00000576835 677 ntBASIC4.46□□□□□ -1.7
HOXC8P31273 MTCO2P2-201ENST00000591258 225 ntBASIC4.46□□□□□ -1.7
HOXC8P31273 AP002906.1-201ENST00000603405 233 ntBASIC4.46□□□□□ -1.7
HOXC8P31273 AC140725.3-201ENST00000616193 880 ntBASIC4.46□□□□□ -1.7
HOXC8P31273 CR392039.5-201ENST00000623201 510 ntBASIC4.46□□□□□ -1.7
HOXC8P31273 AL078595.3-201ENST00000623815 1166 ntBASIC4.46□□□□□ -1.7
HOXC8P31273 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HOXC8P31273 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXC8P31273 OR6C71P-202ENST00000641886 1107 ntBASIC4.46□□□□□ -1.7
HOXC8P31273 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HOXC8P31273 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXC8P31273 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXC8P31273 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
HOXC8P31273 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXC8P31273 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC8P31273 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXC8P31273 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC8P31273 SNORA73.2-201ENST00000364946 201 ntBASIC4.45□□□□□ -1.7
HOXC8P31273 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXC8P31273 RNU6-468P-201ENST00000384003 109 ntBASIC4.45□□□□□ -1.7
HOXC8P31273 U6.112-201ENST00000384129 70 ntBASIC4.45□□□□□ -1.7
HOXC8P31273 MIR449B-201ENST00000384995 97 ntBASIC4.45□□□□□ -1.7
HOXC8P31273 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HOXC8P31273 HMGB3P19-201ENST00000403971 560 ntBASIC4.45□□□□□ -1.7
HOXC8P31273 PRRC2CP1-201ENST00000404428 159 ntBASIC4.45□□□□□ -1.7
HOXC8P31273 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXC8P31273 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXC8P31273 NPM1P34-201ENST00000428821 893 ntBASIC4.45□□□□□ -1.7
HOXC8P31273 RPL23AP89-201ENST00000439324 255 ntBASIC4.45□□□□□ -1.7
HOXC8P31273 AL009048.1-201ENST00000450437 298 ntBASIC4.45□□□□□ -1.7
HOXC8P31273 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXC8P31273 GAPDHP36-201ENST00000480688 918 ntBASIC4.45□□□□□ -1.7
HOXC8P31273 RPS3AP6-201ENST00000484430 795 ntBASIC4.45□□□□□ -1.7
HOXC8P31273 DEFB109F-201ENST00000491870 277 ntBASIC4.45□□□□□ -1.7
HOXC8P31273 RPL29P14-201ENST00000495837 428 ntBASIC4.45□□□□□ -1.7
HOXC8P31273 AC008885.2-201ENST00000509506 930 ntBASIC4.45□□□□□ -1.7
HOXC8P31273 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXC8P31273 RNU6-352P-201ENST00000516908 107 ntBASIC4.45□□□□□ -1.7
HOXC8P31273 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXC8P31273 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXC8P31273 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXC8P31273 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.45□□□□□ -1.7
HOXC8P31273 MIR4509-3-201ENST00000578671 94 ntBASIC4.45□□□□□ -1.7
HOXC8P31273 MIR4509-2-201ENST00000583920 94 ntBASIC4.45□□□□□ -1.7
HOXC8P31273 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXC8P31273 BNIP3P38-201ENST00000601117 544 ntBASIC4.45□□□□□ -1.7
HOXC8P31273 AL357094.1-201ENST00000603845 844 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms