Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 UBL5P2-201ENST00000583788 219 ntBASIC5.07□□□□□ -1.6
CLIP1P30622 AL353684.1-201ENST00000622677 1120 ntBASIC5.07□□□□□ -1.6
CLIP1P30622 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC5.07□□□□□ -1.6
CLIP1P30622 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLIP1P30622 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.07□□□□□ -1.6
CLIP1P30622 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CLIP1P30622 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC5.07□□□□□ -1.6
CLIP1P30622 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLIP1P30622 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLIP1P30622 AC073325.2-201ENST00000339545 159 ntBASIC5.06□□□□□ -1.6
CLIP1P30622 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLIP1P30622 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CLIP1P30622 RHEBP3-201ENST00000411920 351 ntBASIC5.06□□□□□ -1.6
CLIP1P30622 CST9LP2-201ENST00000437612 320 ntBASIC5.06□□□□□ -1.6
CLIP1P30622 HMGB3P11-201ENST00000440127 604 ntBASIC5.06□□□□□ -1.6
CLIP1P30622 NDUFB9P3-201ENST00000521269 501 ntBASIC5.06□□□□□ -1.6
CLIP1P30622 CR383656.14-201ENST00000551951 406 ntBASIC5.06□□□□□ -1.6
CLIP1P30622 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.06□□□□□ -1.6
CLIP1P30622 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.06□□□□□ -1.6
CLIP1P30622 MTCO3P22-201ENST00000603219 784 ntBASIC5.06□□□□□ -1.6
CLIP1P30622 AL033523.1-201ENST00000605153 153 ntBASIC5.06□□□□□ -1.6
CLIP1P30622 AC015849.2-201ENST00000605738 409 ntBASIC5.06□□□□□ -1.6
CLIP1P30622 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.06□□□□□ -1.6
CLIP1P30622 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CLIP1P30622 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLIP1P30622 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLIP1P30622 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLIP1P30622 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLIP1P30622 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CLIP1P30622 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.06□□□□□ -1.6
CLIP1P30622 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.06□□□□□ -1.6
CLIP1P30622 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.06□□□□□ -1.6
CLIP1P30622 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC5.06□□□□□ -1.6
CLIP1P30622 AC093698.1-201ENST00000423843 571 ntBASIC5.06□□□□□ -1.6
CLIP1P30622 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLIP1P30622 BX679664.1-201ENST00000434429 253 ntBASIC5.06□□□□□ -1.6
CLIP1P30622 FGF7P3-201ENST00000454645 303 ntBASIC5.06□□□□□ -1.6
CLIP1P30622 AC010401.1-201ENST00000463867 348 ntBASIC5.06□□□□□ -1.6
CLIP1P30622 AC037198.2-201ENST00000478845 733 ntBASIC5.06□□□□□ -1.6
CLIP1P30622 AC069306.1-201ENST00000507006 843 ntBASIC5.06□□□□□ -1.6
CLIP1P30622 AC008885.1-201ENST00000514930 301 ntBASIC5.06□□□□□ -1.6
CLIP1P30622 HIGD1AP3-201ENST00000515857 278 ntBASIC5.06□□□□□ -1.6
CLIP1P30622 RNU1-143P-201ENST00000516296 146 ntBASIC5.06□□□□□ -1.6
CLIP1P30622 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.06□□□□□ -1.6
CLIP1P30622 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.06□□□□□ -1.6
CLIP1P30622 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC5.06□□□□□ -1.6
CLIP1P30622 U1.23-201ENST00000610293 146 ntBASIC5.06□□□□□ -1.6
CLIP1P30622 RNU1-68P-201ENST00000615382 146 ntBASIC5.06□□□□□ -1.6
CLIP1P30622 U1.39-201ENST00000621562 146 ntBASIC5.06□□□□□ -1.6
CLIP1P30622 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLIP1P30622 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.05□□□□□ -1.6
CLIP1P30622 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLIP1P30622 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CLIP1P30622 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLIP1P30622 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLIP1P30622 SNORA80A-201ENST00000363922 136 ntBASIC5.05□□□□□ -1.6
CLIP1P30622 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLIP1P30622 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CLIP1P30622 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.05□□□□□ -1.6
CLIP1P30622 RPS6P2-201ENST00000454208 705 ntBASIC5.05□□□□□ -1.6
CLIP1P30622 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.05□□□□□ -1.6
CLIP1P30622 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLIP1P30622 AC027807.1-201ENST00000559921 996 ntBASIC5.05□□□□□ -1.6
CLIP1P30622 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.05□□□□□ -1.6
CLIP1P30622 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.05□□□□□ -1.6
CLIP1P30622 AL365400.2-201ENST00000605604 902 ntBASIC5.05□□□□□ -1.6
CLIP1P30622 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
CLIP1P30622 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC5.04□□□□□ -1.6
CLIP1P30622 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC5.04□□□□□ -1.6
CLIP1P30622 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
CLIP1P30622 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CLIP1P30622 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CLIP1P30622 AL031985.3-201ENST00000565390 2449 ntBASIC5.04□□□□□ -1.6
CLIP1P30622 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CLIP1P30622 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC5.04□□□□□ -1.6
CLIP1P30622 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC5.04□□□□□ -1.6
CLIP1P30622 AC007899.1-201ENST00000412776 775 ntBASIC5.04□□□□□ -1.6
CLIP1P30622 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.04□□□□□ -1.6
CLIP1P30622 AL365396.1-201ENST00000430854 671 ntBASIC5.04□□□□□ -1.6
CLIP1P30622 AC025750.2-201ENST00000442609 450 ntBASIC5.04□□□□□ -1.6
CLIP1P30622 FTH1P25-201ENST00000447665 469 ntBASIC5.04□□□□□ -1.6
CLIP1P30622 HMGB1P5-202ENST00000451497 985 ntBASIC5.04□□□□□ -1.6
CLIP1P30622 RNU4ATAC3P-201ENST00000516699 126 ntBASIC5.04□□□□□ -1.6
CLIP1P30622 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.04□□□□□ -1.6
CLIP1P30622 MIR4672-201ENST00000583126 81 ntBASIC5.04□□□□□ -1.6
CLIP1P30622 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC5.04□□□□□ -1.6
CLIP1P30622 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.04□□□□□ -1.6
CLIP1P30622 ATP5A1P2-202ENST00000616464 443 ntBASIC5.04□□□□□ -1.6
CLIP1P30622 AC119674.1-212ENST00000641155 993 ntBASIC5.04□□□□□ -1.6
CLIP1P30622 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CLIP1P30622 FAM35BP-202ENST00000497389 3337 ntBASIC5.03□□□□□ -1.6
CLIP1P30622 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC5.03□□□□□ -1.6
CLIP1P30622 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLIP1P30622 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLIP1P30622 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.03□□□□□ -1.6
CLIP1P30622 Z98941.1-201ENST00000407764 100 ntBASIC5.03□□□□□ -1.6
CLIP1P30622 AC127526.1-201ENST00000417526 366 ntBASIC5.03□□□□□ -1.6
CLIP1P30622 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.03□□□□□ -1.6
CLIP1P30622 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.03□□□□□ -1.6
CLIP1P30622 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms