Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.34□□□□□ -1.71
ABCD3P28288 AC026410.2-201ENST00000460281 156 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 AC004263.1-201ENST00000479327 332 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 AC025164.1-201ENST00000496249 478 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 AC108145.1-201ENST00000503770 153 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.34□□□□□ -1.71
ABCD3P28288 AC026412.2-201ENST00000512270 1075 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 RN7SKP116-201ENST00000516902 319 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 AC023538.1-201ENST00000534576 736 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ABCD3P28288 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.34□□□□□ -1.71
ABCD3P28288 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.34□□□□□ -1.71
ABCD3P28288 HSPE1P3-201ENST00000559254 309 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.34□□□□□ -1.71
ABCD3P28288 RN7SL176P-201ENST00000580352 264 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 AC006270.3-201ENST00000605967 1036 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 SNORD91B-202ENST00000608459 222 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.34□□□□□ -1.71
ABCD3P28288 AC073968.1-201ENST00000618594 637 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 U6.101-201ENST00000637707 76 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 DCAF13P1-201ENST00000495256 1330 ntBASIC4.34□□□□□ -1.71
ABCD3P28288 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ABCD3P28288 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
ABCD3P28288 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.34□□□□□ -1.71
ABCD3P28288 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ABCD3P28288 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
ABCD3P28288 DHX9P1-201ENST00000436565 3076 ntBASIC4.34□□□□□ -1.72
ABCD3P28288 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
ABCD3P28288 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
ABCD3P28288 AC027290.2-201ENST00000623210 18662 ntBASIC4.34□□□□□ -1.72
ABCD3P28288 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
ABCD3P28288 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.33□□□□□ -1.72
ABCD3P28288 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.33□□□□□ -1.72
ABCD3P28288 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ABCD3P28288 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.33□□□□□ -1.72
ABCD3P28288 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.33□□□□□ -1.72
ABCD3P28288 MTCO1P23-201ENST00000415223 1526 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ABCD3P28288 AC053481.2-202ENST00000582394 1500 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ABCD3P28288 OR5BR1P-201ENST00000524992 1330 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
ABCD3P28288 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ABCD3P28288 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
ABCD3P28288 IL6STP1-201ENST00000346911 1020 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 RNU6-339P-201ENST00000384310 107 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ABCD3P28288 ARF4P3-201ENST00000397387 509 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 AL049697.2-201ENST00000403708 294 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 RNU6-757P-201ENST00000410334 100 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.33□□□□□ -1.72
ABCD3P28288 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.33□□□□□ -1.72
ABCD3P28288 ATG4AP1-201ENST00000416893 538 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.33□□□□□ -1.72
ABCD3P28288 AC140479.3-201ENST00000418944 1126 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 AC069213.2-201ENST00000420238 366 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.33□□□□□ -1.72
ABCD3P28288 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.33□□□□□ -1.72
ABCD3P28288 NMNAT1P2-201ENST00000435192 860 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 RPS25P9-201ENST00000435591 252 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.33□□□□□ -1.72
ABCD3P28288 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.33□□□□□ -1.72
ABCD3P28288 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.33□□□□□ -1.72
ABCD3P28288 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.33□□□□□ -1.72
ABCD3P28288 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.33□□□□□ -1.72
ABCD3P28288 TRGVB-201ENST00000453257 471 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.33□□□□□ -1.72
ABCD3P28288 PLGLA-201ENST00000465668 449 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 AC090142.1-201ENST00000465776 462 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
ABCD3P28288 AC108941.1-201ENST00000502853 530 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ABCD3P28288 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.33□□□□□ -1.72
ABCD3P28288 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.33□□□□□ -1.72
ABCD3P28288 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.33□□□□□ -1.72
ABCD3P28288 IGKV2D-36-201ENST00000518643 226 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.33□□□□□ -1.72
ABCD3P28288 AP003385.6-201ENST00000531603 374 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.33□□□□□ -1.72
ABCD3P28288 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.33□□□□□ -1.72
ABCD3P28288 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.33□□□□□ -1.72
ABCD3P28288 AC105129.1-201ENST00000560250 297 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.33□□□□□ -1.72
ABCD3P28288 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.33□□□□□ -1.72
ABCD3P28288 AC005962.2-201ENST00000611427 652 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 AL161616.1-201ENST00000611867 286 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 MIR8069-1-201ENST00000616627 86 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 AL355493.4-201ENST00000618530 292 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.33□□□□□ -1.72
ABCD3P28288 MIR8069-2-201ENST00000621412 86 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 AP002791.1-201ENST00000623291 381 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 AC097520.1-201ENST00000624435 385 ntBASIC4.33□□□□□ -1.72
ABCD3P28288 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
ABCD3P28288 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ABCD3P28288 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
ABCD3P28288 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.32□□□□□ -1.72
ABCD3P28288 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ABCD3P28288 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
ABCD3P28288 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms