Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC013429.2-201ENST00000418798 781 ntBASIC4.85□□□□□ -1.63
CD40P25942 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.85□□□□□ -1.63
CD40P25942 RPL7P57-201ENST00000423238 740 ntBASIC4.85□□□□□ -1.63
CD40P25942 AC008065.1-201ENST00000428525 348 ntBASIC4.85□□□□□ -1.63
CD40P25942 OR51AB1P-201ENST00000429046 620 ntBASIC4.85□□□□□ -1.63
CD40P25942 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.85□□□□□ -1.63
CD40P25942 AC019185.1-201ENST00000442718 389 ntBASIC4.85□□□□□ -1.63
CD40P25942 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.85□□□□□ -1.63
CD40P25942 AC132479.1-201ENST00000449160 144 ntBASIC4.85□□□□□ -1.63
CD40P25942 MTND2P24-201ENST00000453434 806 ntBASIC4.85□□□□□ -1.63
CD40P25942 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.85□□□□□ -1.63
CD40P25942 AL035090.1-201ENST00000454835 332 ntBASIC4.85□□□□□ -1.63
CD40P25942 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.85□□□□□ -1.63
CD40P25942 RPL37P6-202ENST00000464216 403 ntBASIC4.85□□□□□ -1.63
CD40P25942 RPS26P39-201ENST00000469206 341 ntBASIC4.85□□□□□ -1.63
CD40P25942 AC023598.1-201ENST00000472521 361 ntBASIC4.85□□□□□ -1.63
CD40P25942 RN7SL583P-201ENST00000475692 287 ntBASIC4.85□□□□□ -1.63
CD40P25942 RN7SL629P-201ENST00000489622 285 ntBASIC4.85□□□□□ -1.63
CD40P25942 RN7SL547P-201ENST00000490793 290 ntBASIC4.85□□□□□ -1.63
CD40P25942 RPL23AP72-201ENST00000492447 435 ntBASIC4.85□□□□□ -1.63
CD40P25942 HMGB1P21-201ENST00000502313 581 ntBASIC4.85□□□□□ -1.63
CD40P25942 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.85□□□□□ -1.63
CD40P25942 AC010587.1-201ENST00000505809 469 ntBASIC4.85□□□□□ -1.63
CD40P25942 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.85□□□□□ -1.63
CD40P25942 RNU6-445P-201ENST00000516949 107 ntBASIC4.85□□□□□ -1.63
CD40P25942 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.85□□□□□ -1.63
CD40P25942 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.85□□□□□ -1.63
CD40P25942 HAUS8P1-201ENST00000549005 542 ntBASIC4.85□□□□□ -1.63
CD40P25942 AC127381.1-201ENST00000555979 939 ntBASIC4.85□□□□□ -1.63
CD40P25942 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC4.85□□□□□ -1.63
CD40P25942 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.85□□□□□ -1.63
CD40P25942 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.85□□□□□ -1.63
CD40P25942 AC060771.1-201ENST00000582031 164 ntBASIC4.85□□□□□ -1.63
CD40P25942 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.85□□□□□ -1.63
CD40P25942 AC012616.1-201ENST00000600294 197 ntBASIC4.85□□□□□ -1.63
CD40P25942 AL391646.1-201ENST00000603860 190 ntBASIC4.85□□□□□ -1.63
CD40P25942 AC008277.2-201ENST00000605196 797 ntBASIC4.85□□□□□ -1.63
CD40P25942 AC006338.1-201ENST00000618453 749 ntBASIC4.85□□□□□ -1.63
CD40P25942 AC019226.1-201ENST00000625666 515 ntBASIC4.85□□□□□ -1.63
CD40P25942 AL596275.2-204ENST00000641628 552 ntBASIC4.85□□□□□ -1.63
CD40P25942 AL596275.2-206ENST00000641957 626 ntBASIC4.85□□□□□ -1.63
CD40P25942 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CD40P25942 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC4.85□□□□□ -1.63
CD40P25942 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.85□□□□□ -1.63
CD40P25942 AC008758.3-201ENST00000507003 1829 ntBASIC4.85□□□□□ -1.63
CD40P25942 AL450326.2-201ENST00000421913 1962 ntBASIC4.85□□□□□ -1.63
CD40P25942 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.85□□□□□ -1.63
CD40P25942 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CD40P25942 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD40P25942 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD40P25942 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
CD40P25942 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC4.84□□□□□ -1.63
CD40P25942 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CD40P25942 AC018809.2-201ENST00000602436 3823 ntBASIC4.84□□□□□ -1.63
CD40P25942 SAGE2P-201ENST00000420011 2126 ntBASIC4.84□□□□□ -1.63
CD40P25942 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CD40P25942 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.84□□□□□ -1.63
CD40P25942 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.84□□□□□ -1.63
CD40P25942 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.84□□□□□ -1.63
CD40P25942 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CD40P25942 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC4.84□□□□□ -1.63
CD40P25942 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CD40P25942 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CD40P25942 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CD40P25942 RN7SKP6-201ENST00000364795 319 ntBASIC4.84□□□□□ -1.63
CD40P25942 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CD40P25942 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.84□□□□□ -1.63
CD40P25942 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CD40P25942 RAP1BP3-201ENST00000407180 549 ntBASIC4.84□□□□□ -1.63
CD40P25942 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.84□□□□□ -1.63
CD40P25942 Z93019.1-201ENST00000416450 973 ntBASIC4.84□□□□□ -1.63
CD40P25942 CYCSP10-201ENST00000417973 294 ntBASIC4.84□□□□□ -1.63
CD40P25942 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.84□□□□□ -1.63
CD40P25942 AL138785.1-201ENST00000425821 331 ntBASIC4.84□□□□□ -1.63
CD40P25942 MTCO2P19-201ENST00000427513 598 ntBASIC4.84□□□□□ -1.63
CD40P25942 AC114495.1-201ENST00000441274 436 ntBASIC4.84□□□□□ -1.63
CD40P25942 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.84□□□□□ -1.63
CD40P25942 PRPF38AP1-201ENST00000451976 933 ntBASIC4.84□□□□□ -1.63
CD40P25942 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.84□□□□□ -1.63
CD40P25942 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.84□□□□□ -1.63
CD40P25942 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CD40P25942 AC021382.1-201ENST00000483523 359 ntBASIC4.84□□□□□ -1.63
CD40P25942 RPL15P21-201ENST00000495592 567 ntBASIC4.84□□□□□ -1.63
CD40P25942 OR5H5P-201ENST00000503164 928 ntBASIC4.84□□□□□ -1.63
CD40P25942 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.84□□□□□ -1.63
CD40P25942 AC074344.1-201ENST00000512823 224 ntBASIC4.84□□□□□ -1.63
CD40P25942 AC008549.1-201ENST00000512900 643 ntBASIC4.84□□□□□ -1.63
CD40P25942 RN7SKP99-201ENST00000517028 307 ntBASIC4.84□□□□□ -1.63
CD40P25942 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC4.84□□□□□ -1.63
CD40P25942 IGKV2D-36-201ENST00000518643 226 ntBASIC4.84□□□□□ -1.63
CD40P25942 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.84□□□□□ -1.63
CD40P25942 AC107934.1-201ENST00000522215 217 ntBASIC4.84□□□□□ -1.63
CD40P25942 PTP4A1P6-201ENST00000531034 478 ntBASIC4.84□□□□□ -1.63
CD40P25942 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CD40P25942 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.84□□□□□ -1.63
CD40P25942 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.84□□□□□ -1.63
CD40P25942 AL121579.1-201ENST00000555129 305 ntBASIC4.84□□□□□ -1.63
CD40P25942 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.84□□□□□ -1.63
CD40P25942 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.84□□□□□ -1.63
CD40P25942 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms