Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AC092162.1-201ENST00000432828 434 ntBASIC7.95□□□□□ -1.14
CD44P16070 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CD44P16070 RPL23AP58-201ENST00000440453 469 ntBASIC7.95□□□□□ -1.14
CD44P16070 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CD44P16070 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC7.95□□□□□ -1.14
CD44P16070 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC7.95□□□□□ -1.14
CD44P16070 RN7SL152P-201ENST00000484176 298 ntBASIC7.95□□□□□ -1.14
CD44P16070 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC7.95□□□□□ -1.14
CD44P16070 SNORA27.4-201ENST00000516650 95 ntBASIC7.95□□□□□ -1.14
CD44P16070 AC069113.1-201ENST00000517763 267 ntBASIC7.95□□□□□ -1.14
CD44P16070 IGKV2-36-201ENST00000519999 223 ntBASIC7.95□□□□□ -1.14
CD44P16070 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC7.95□□□□□ -1.14
CD44P16070 AC136944.5-201ENST00000573021 151 ntBASIC7.95□□□□□ -1.14
CD44P16070 MIR3135A-201ENST00000578460 77 ntBASIC7.95□□□□□ -1.14
CD44P16070 AC068790.4-201ENST00000602474 263 ntBASIC7.95□□□□□ -1.14
CD44P16070 AC006077.1-201ENST00000604746 343 ntBASIC7.95□□□□□ -1.14
CD44P16070 AC009318.2-201ENST00000610917 651 ntBASIC7.95□□□□□ -1.14
CD44P16070 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.95□□□□□ -1.14
CD44P16070 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
CD44P16070 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
CD44P16070 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CD44P16070 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.95□□□□□ -1.14
CD44P16070 AC092821.3-202ENST00000641304 2767 ntBASIC7.95□□□□□ -1.14
CD44P16070 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.95□□□□□ -1.14
CD44P16070 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC7.95□□□□□ -1.14
CD44P16070 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CD44P16070 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.95□□□□□ -1.14
CD44P16070 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CD44P16070 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CD44P16070 MAPK10-371ENST00000641952 5209 ntBASIC7.95□□□□□ -1.14
CD44P16070 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CD44P16070 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
CD44P16070 AC097634.1-201ENST00000604491 2467 ntBASIC7.94□□□□□ -1.14
CD44P16070 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.94□□□□□ -1.14
CD44P16070 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
CD44P16070 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CD44P16070 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CD44P16070 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CD44P16070 CHRDL1-201ENST00000372042 1934 ntAPPRIS ALT1 TSL 2 BASIC7.94□□□□□ -1.14
CD44P16070 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
CD44P16070 PARP4P1-201ENST00000435945 2337 ntBASIC7.94□□□□□ -1.14
CD44P16070 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC7.94□□□□□ -1.14
CD44P16070 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.94□□□□□ -1.14
CD44P16070 Y_RNA.75-201ENST00000362927 97 ntBASIC7.94□□□□□ -1.14
CD44P16070 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CD44P16070 ARMCX7P-201ENST00000372828 562 ntBASIC7.94□□□□□ -1.14
CD44P16070 Y_RNA.420-201ENST00000384043 110 ntBASIC7.94□□□□□ -1.14
CD44P16070 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.94□□□□□ -1.14
CD44P16070 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.94□□□□□ -1.14
CD44P16070 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC7.94□□□□□ -1.14
CD44P16070 RPS12P23-201ENST00000419579 400 ntBASIC7.94□□□□□ -1.14
CD44P16070 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC7.94□□□□□ -1.14
CD44P16070 UQCRBP2-201ENST00000447827 297 ntBASIC7.94□□□□□ -1.14
CD44P16070 HIST1H2APS6-201ENST00000448609 364 ntBASIC7.94□□□□□ -1.14
CD44P16070 PSPC1P2-201ENST00000455130 225 ntBASIC7.94□□□□□ -1.14
CD44P16070 RPS12P20-201ENST00000464109 380 ntBASIC7.94□□□□□ -1.14
CD44P16070 RNU7-121P-201ENST00000516604 62 ntBASIC7.94□□□□□ -1.14
CD44P16070 IGLV1-62-201ENST00000518003 441 ntBASIC7.94□□□□□ -1.14
CD44P16070 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC7.94□□□□□ -1.14
CD44P16070 AC087257.2-201ENST00000538759 928 ntBASIC7.94□□□□□ -1.14
CD44P16070 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC7.94□□□□□ -1.14
CD44P16070 MIR4659A-201ENST00000580269 81 ntBASIC7.94□□□□□ -1.14
CD44P16070 AP001120.4-201ENST00000590231 108 ntBASIC7.94□□□□□ -1.14
CD44P16070 AC012119.1-201ENST00000603184 222 ntBASIC7.94□□□□□ -1.14
CD44P16070 RPS28P1-201ENST00000604589 187 ntBASIC7.94□□□□□ -1.14
CD44P16070 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC7.94□□□□□ -1.14
CD44P16070 AP002826.1-201ENST00000608835 315 ntBASIC7.94□□□□□ -1.14
CD44P16070 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
CD44P16070 CYP3A51P-201ENST00000633513 256 ntBASIC7.94□□□□□ -1.14
CD44P16070 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC7.94□□□□□ -1.14
CD44P16070 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC7.94□□□□□ -1.14
CD44P16070 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CD44P16070 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
CD44P16070 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CD44P16070 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CD44P16070 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
CD44P16070 MAPK10-323ENST00000641493 3207 ntBASIC7.94□□□□□ -1.14
CD44P16070 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.94□□□□□ -1.14
CD44P16070 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
CD44P16070 AC083843.3-201ENST00000623679 2186 ntBASIC7.94□□□□□ -1.14
CD44P16070 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
CD44P16070 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CD44P16070 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
CD44P16070 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
CD44P16070 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC7.94□□□□□ -1.14
CD44P16070 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.94□□□□□ -1.14
CD44P16070 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
CD44P16070 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
CD44P16070 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.93□□□□□ -1.14
CD44P16070 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.93□□□□□ -1.14
CD44P16070 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
CD44P16070 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CD44P16070 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CD44P16070 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CD44P16070 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CD44P16070 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CD44P16070 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CD44P16070 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CD44P16070 RNA5SP396-201ENST00000364834 120 ntBASIC7.93□□□□□ -1.14
CD44P16070 Y_RNA.480-201ENST00000384364 102 ntBASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms