Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ITGA4P13612 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ITGA4P13612 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
ITGA4P13612 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.71□□□□□ -1.49
ITGA4P13612 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.71□□□□□ -1.49
ITGA4P13612 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.71□□□□□ -1.49
ITGA4P13612 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ITGA4P13612 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
ITGA4P13612 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ITGA4P13612 PANDAR-201ENST00000629595 1506 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 OR4K15-201ENST00000305051 1216 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ITGA4P13612 RNU6-444P-201ENST00000383988 108 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 MIR550A3-201ENST00000390735 95 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 RNU6-780P-201ENST00000391030 104 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.71□□□□□ -1.5
ITGA4P13612 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.71□□□□□ -1.5
ITGA4P13612 AL139413.1-201ENST00000421309 217 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 AL590762.4-201ENST00000425885 253 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.71□□□□□ -1.5
ITGA4P13612 ELOCP14-201ENST00000428070 331 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.71□□□□□ -1.5
ITGA4P13612 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.71□□□□□ -1.5
ITGA4P13612 AL358934.1-201ENST00000432346 324 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 USP12PX-201ENST00000432383 1057 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
ITGA4P13612 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.71□□□□□ -1.5
ITGA4P13612 PSMD10P3-201ENST00000437000 448 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.71□□□□□ -1.5
ITGA4P13612 SNRPEP7-201ENST00000438350 220 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 ELOCP7-201ENST00000439968 331 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 RABEPKP1-201ENST00000440529 1026 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 MTND6P13-201ENST00000443510 523 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.71□□□□□ -1.5
ITGA4P13612 Z82190.1-201ENST00000454534 490 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 OR6K1P-201ENST00000456766 971 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.71□□□□□ -1.5
ITGA4P13612 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC5.71□□□□□ -1.5
ITGA4P13612 AC005912.1-201ENST00000495392 255 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.71□□□□□ -1.5
ITGA4P13612 AC019235.1-201ENST00000503847 207 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.71□□□□□ -1.5
ITGA4P13612 RNU6-488P-201ENST00000515918 99 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 RNU6-507P-201ENST00000516045 100 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 RN7SKP147-201ENST00000517154 244 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 OR5AQ1P-201ENST00000527596 927 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ITGA4P13612 AP000790.1-201ENST00000528891 737 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 AP000676.2-201ENST00000529711 301 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 AC027369.5-201ENST00000533838 755 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.71□□□□□ -1.5
ITGA4P13612 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.71□□□□□ -1.5
ITGA4P13612 AL391840.1-201ENST00000571144 367 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 AP001180.3-201ENST00000582221 145 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.71□□□□□ -1.5
ITGA4P13612 Y_RNA.804-201ENST00000615262 101 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 AC002553.4-201ENST00000616896 331 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
ITGA4P13612 AC099654.6-201ENST00000636487 512 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 AC135068.12-201ENST00000637370 931 ntBASIC5.71□□□□□ -1.5
ITGA4P13612 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
ITGA4P13612 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
ITGA4P13612 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ITGA4P13612 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ITGA4P13612 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
ITGA4P13612 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ITGA4P13612 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
ITGA4P13612 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ITGA4P13612 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ITGA4P13612 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
ITGA4P13612 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
ITGA4P13612 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ITGA4P13612 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.71□□□□□ -1.5
ITGA4P13612 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
ITGA4P13612 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.71□□□□□ -1.5
ITGA4P13612 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.7□□□□□ -1.5
ITGA4P13612 GVINP1-202ENST00000531871 7271 ntBASIC5.7□□□□□ -1.5
ITGA4P13612 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ITGA4P13612 OR11H4-201ENST00000315409 1082 ntBASIC5.7□□□□□ -1.5
ITGA4P13612 U3.3-201ENST00000362986 216 ntBASIC5.7□□□□□ -1.5
ITGA4P13612 RNY4P14-201ENST00000363656 96 ntBASIC5.7□□□□□ -1.5
ITGA4P13612 U3.23-201ENST00000391132 200 ntBASIC5.7□□□□□ -1.5
ITGA4P13612 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
ITGA4P13612 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.7□□□□□ -1.5
ITGA4P13612 BX295541.1-201ENST00000417774 250 ntBASIC5.7□□□□□ -1.5
ITGA4P13612 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.7□□□□□ -1.5
ITGA4P13612 HMGN2P27-201ENST00000427352 270 ntBASIC5.7□□□□□ -1.5
ITGA4P13612 AC073464.1-201ENST00000429823 534 ntBASIC5.7□□□□□ -1.5
ITGA4P13612 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.7□□□□□ -1.5
ITGA4P13612 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.7□□□□□ -1.5
ITGA4P13612 SKP1P1-201ENST00000438081 489 ntBASIC5.7□□□□□ -1.5
ITGA4P13612 AC098614.3-201ENST00000438957 440 ntBASIC5.7□□□□□ -1.5
ITGA4P13612 ACTR3P2-201ENST00000439585 1257 ntBASIC5.7□□□□□ -1.5
ITGA4P13612 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.7□□□□□ -1.5
ITGA4P13612 DPPA3P1-201ENST00000448050 469 ntBASIC5.7□□□□□ -1.5
ITGA4P13612 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.7□□□□□ -1.5
ITGA4P13612 AC092647.2-201ENST00000452998 253 ntBASIC5.7□□□□□ -1.5
ITGA4P13612 BTF3P5-201ENST00000457252 467 ntBASIC5.7□□□□□ -1.5
ITGA4P13612 AC009646.1-201ENST00000510455 318 ntBASIC5.7□□□□□ -1.5
ITGA4P13612 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms