Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC009646.1-201ENST00000510455 318 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.31□□□□□ -1.56
COL6A2P12110 AC114781.4-201ENST00000513707 639 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 SCARNA16.4-201ENST00000516956 187 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL6A2P12110 AC100784.1-201ENST00000522790 310 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.31□□□□□ -1.56
COL6A2P12110 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.31□□□□□ -1.56
COL6A2P12110 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.31□□□□□ -1.56
COL6A2P12110 AC006349.1-201ENST00000555526 235 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 NRBF2P1-201ENST00000587407 859 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.31□□□□□ -1.56
COL6A2P12110 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.31□□□□□ -1.56
COL6A2P12110 AL359999.1-201ENST00000604513 294 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.31□□□□□ -1.56
COL6A2P12110 AL590282.1-201ENST00000610379 1136 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
COL6A2P12110 AL096712.1-201ENST00000614561 159 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 AL118522.2-201ENST00000616045 615 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 AC009704.2-201ENST00000618739 483 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL6A2P12110 PISRT1-201ENST00000626175 531 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 LRRC77P-213ENST00000637727 880 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 OR2L1P-202ENST00000641567 1023 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.31□□□□□ -1.56
COL6A2P12110 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.31□□□□□ -1.56
COL6A2P12110 OR13C1P-202ENST00000641378 2919 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
COL6A2P12110 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL6A2P12110 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL6A2P12110 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.31□□□□□ -1.56
COL6A2P12110 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
COL6A2P12110 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.3□□□□□ -1.56
COL6A2P12110 BTBD10P1-201ENST00000549824 1352 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL6A2P12110 OR55B1P-203ENST00000641518 2602 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL6A2P12110 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL6A2P12110 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL6A2P12110 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.3□□□□□ -1.56
COL6A2P12110 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL6A2P12110 AC010329.2-201ENST00000595195 2737 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL6A2P12110 AL731532.2-201ENST00000623542 1953 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.3□□□□□ -1.56
COL6A2P12110 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
COL6A2P12110 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL6A2P12110 RNU6-921P-201ENST00000384361 107 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 CALM2P3-201ENST00000400429 449 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 PRELID3BP11-201ENST00000414230 479 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.3□□□□□ -1.56
COL6A2P12110 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.3□□□□□ -1.56
COL6A2P12110 AC093155.2-201ENST00000420734 937 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 RPS3P2-201ENST00000421346 701 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 AC069157.1-201ENST00000421749 137 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 AL662874.1-201ENST00000426065 230 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 AL445669.1-201ENST00000426743 755 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.3□□□□□ -1.56
COL6A2P12110 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.3□□□□□ -1.56
COL6A2P12110 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.3□□□□□ -1.56
COL6A2P12110 AC023347.2-201ENST00000433994 462 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.3□□□□□ -1.56
COL6A2P12110 UBE2V1P7-201ENST00000446395 340 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 AC012512.1-201ENST00000446594 718 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.3□□□□□ -1.56
COL6A2P12110 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.3□□□□□ -1.56
COL6A2P12110 Z82190.1-201ENST00000454534 490 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 BTF3P5-201ENST00000457252 467 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.3□□□□□ -1.56
COL6A2P12110 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.3□□□□□ -1.56
COL6A2P12110 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.3□□□□□ -1.56
COL6A2P12110 AC041039.1-201ENST00000485656 536 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.3□□□□□ -1.56
COL6A2P12110 CYCSP22-201ENST00000517555 339 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 AC104986.1-201ENST00000517978 436 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.3□□□□□ -1.56
COL6A2P12110 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5.3□□□□□ -1.56
COL6A2P12110 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.3□□□□□ -1.56
COL6A2P12110 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.3□□□□□ -1.56
COL6A2P12110 AC005341.1-201ENST00000571086 708 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 TPMTP1-201ENST00000592307 737 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.3□□□□□ -1.56
COL6A2P12110 DUXAP4-201ENST00000603046 613 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.3□□□□□ -1.56
COL6A2P12110 MLECP1-201ENST00000615893 709 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 MIR6729-201ENST00000618194 65 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.3□□□□□ -1.56
COL6A2P12110 AC099654.5-201ENST00000636479 350 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL6A2P12110 AC083843.2-201ENST00000568248 6253 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL6A2P12110 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.3□□□□□ -1.56
COL6A2P12110 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL6A2P12110 AC107081.3-201ENST00000612715 2034 ntBASIC5.3□□□□□ -1.56
COL6A2P12110 AC008079.2-201ENST00000623543 20396 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.29□□□□□ -1.56
COL6A2P12110 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL6A2P12110 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms