Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 RPL21P109-201ENST00000422213 475 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 AC005517.2-201ENST00000424673 553 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 ARF4P2-201ENST00000430209 526 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 RPL21P112-201ENST00000434403 463 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
UBCP0CG48 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.36□□□□□ -1.87
UBCP0CG48 RSL24D1P2-201ENST00000445584 366 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.36□□□□□ -1.87
UBCP0CG48 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.36□□□□□ -1.87
UBCP0CG48 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.36□□□□□ -1.87
UBCP0CG48 AC110792.1-201ENST00000491826 472 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 AC008885.2-201ENST00000509506 930 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 ARL2BPP6-201ENST00000512757 439 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
UBCP0CG48 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.36□□□□□ -1.87
UBCP0CG48 RNU6-751P-201ENST00000516382 101 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 RN7SKP83-201ENST00000516512 178 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.36□□□□□ -1.87
UBCP0CG48 OR4R3P-201ENST00000525084 838 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.36□□□□□ -1.87
UBCP0CG48 AP003717.3-201ENST00000544832 1180 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.36□□□□□ -1.87
UBCP0CG48 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.36□□□□□ -1.87
UBCP0CG48 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.36□□□□□ -1.87
UBCP0CG48 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.36□□□□□ -1.87
UBCP0CG48 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.36□□□□□ -1.87
UBCP0CG48 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.36□□□□□ -1.87
UBCP0CG48 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.36□□□□□ -1.87
UBCP0CG48 CYP2C60P-201ENST00000566088 139 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.36□□□□□ -1.87
UBCP0CG48 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.36□□□□□ -1.87
UBCP0CG48 AC125494.3-201ENST00000602759 455 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.36□□□□□ -1.87
UBCP0CG48 RNU4-89P-201ENST00000607443 133 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 RMST_8.1-201ENST00000610287 165 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 AC018926.3-201ENST00000618841 406 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 AL162233.1-201ENST00000620014 944 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.36□□□□□ -1.87
UBCP0CG48 MTND5P28-201ENST00000438005 1594 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBCP0CG48 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBCP0CG48 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.36□□□□□ -1.87
UBCP0CG48 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.36□□□□□ -1.87
UBCP0CG48 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBCP0CG48 AC010733.2-201ENST00000589496 5702 ntBASIC3.36□□□□□ -1.87
UBCP0CG48 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBCP0CG48 PWAR6-201ENST00000552334 4618 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
UBCP0CG48 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.35□□□□□ -1.87
UBCP0CG48 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
UBCP0CG48 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
UBCP0CG48 PABPC1P7-201ENST00000413177 1513 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBCP0CG48 RNU6-543P-201ENST00000362576 108 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 AL590704.1-201ENST00000402856 794 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 HMGB3P18-201ENST00000406327 590 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.35□□□□□ -1.87
UBCP0CG48 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.35□□□□□ -1.87
UBCP0CG48 Z97055.1-201ENST00000419730 712 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 HIGD1AP12-201ENST00000427832 281 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 RPS27AP12-201ENST00000429552 465 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.35□□□□□ -1.87
UBCP0CG48 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.35□□□□□ -1.87
UBCP0CG48 RPL6P5-201ENST00000445678 828 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 RPS29P31-201ENST00000446147 164 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 RPL23AP23-201ENST00000452590 471 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.35□□□□□ -1.87
UBCP0CG48 RPS29P33-201ENST00000456717 146 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.35□□□□□ -1.87
UBCP0CG48 AC008565.1-201ENST00000509046 885 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.35□□□□□ -1.87
UBCP0CG48 RNA5SP164-201ENST00000516533 110 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
UBCP0CG48 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.35□□□□□ -1.87
UBCP0CG48 HIGD1AP10-201ENST00000527837 282 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
UBCP0CG48 PDCL2P2-201ENST00000533651 189 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.35□□□□□ -1.87
UBCP0CG48 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.35□□□□□ -1.87
UBCP0CG48 AC027104.1-201ENST00000563702 681 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.35□□□□□ -1.87
UBCP0CG48 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.35□□□□□ -1.87
UBCP0CG48 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.35□□□□□ -1.87
UBCP0CG48 MTATP6P25-201ENST00000574491 261 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 MIR5047-201ENST00000579212 100 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 RN7SL600P-201ENST00000581811 299 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.35□□□□□ -1.87
UBCP0CG48 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.35□□□□□ -1.87
UBCP0CG48 SNRPGP15-201ENST00000600149 222 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.35□□□□□ -1.87
UBCP0CG48 AC005229.3-201ENST00000603438 323 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 AC112230.1-201ENST00000604342 547 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 ARF4P1-201ENST00000605447 541 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 AC004775.1-201ENST00000607389 753 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 XIST_intron.1-201ENST00000619444 68 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.35□□□□□ -1.87
UBCP0CG48 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBCP0CG48 MIR7153-201ENST00000637758 57 ntBASIC3.35□□□□□ -1.87
UBCP0CG48 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBCP0CG48 FAM91A3P-201ENST00000456826 2544 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms