Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXC6P09630 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HOXC6P09630 SNORD65C-201ENST00000390962 71 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 RNU6-932P-201ENST00000391108 106 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 RNA5SP105-201ENST00000391123 113 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 RNU4-74P-201ENST00000411280 161 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 LUZP4P1-201ENST00000415420 344 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXC6P09630 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXC6P09630 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXC6P09630 HIGD1AP12-201ENST00000427832 281 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 HSFY3P-201ENST00000444242 1191 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 OR51B8P-201ENST00000449892 769 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXC6P09630 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXC6P09630 ATG12P2-201ENST00000456830 416 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 RPL36AP13-201ENST00000457490 317 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 TPTE2P5-203ENST00000458118 728 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 OR9M1P-201ENST00000459641 921 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 RPS20P21-201ENST00000466859 343 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXC6P09630 ACTR3P3-201ENST00000480448 893 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 RPS4XP15-201ENST00000489210 795 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 AL139099.1-201ENST00000497398 403 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 BTG4P1-201ENST00000510421 183 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 SNORA3.4-201ENST00000515969 96 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 RNU6-1308P-201ENST00000516817 103 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXC6P09630 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXC6P09630 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.65□□□□□ -1.67
HOXC6P09630 MIR5684-201ENST00000585074 65 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXC6P09630 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXC6P09630 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXC6P09630 AC009237.15-201ENST00000610252 501 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 MIR6868-201ENST00000611215 58 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 AL138478.1-201ENST00000612252 832 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 AC024257.5-201ENST00000612739 531 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 AL121890.2-201ENST00000617644 465 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 MIR7702-201ENST00000621931 59 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 RPL23AP61-201ENST00000623642 466 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 AP005264.7-201ENST00000625003 745 ntBASIC4.65□□□□□ -1.67
HOXC6P09630 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HOXC6P09630 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
HOXC6P09630 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HOXC6P09630 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HOXC6P09630 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HOXC6P09630 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.65□□□□□ -1.67
HOXC6P09630 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXC6P09630 AC093591.2-201ENST00000565254 3843 ntBASIC4.64□□□□□ -1.67
HOXC6P09630 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXC6P09630 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
HOXC6P09630 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXC6P09630 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXC6P09630 AL606537.1-201ENST00000607258 2011 ntBASIC4.64□□□□□ -1.67
HOXC6P09630 MIR142-201ENST00000384835 87 ntBASIC4.64□□□□□ -1.67
HOXC6P09630 MIR7-3-201ENST00000384898 110 ntBASIC4.64□□□□□ -1.67
HOXC6P09630 AC093578.1-201ENST00000415219 368 ntBASIC4.64□□□□□ -1.67
HOXC6P09630 MORF4L1P6-201ENST00000418771 268 ntBASIC4.64□□□□□ -1.67
HOXC6P09630 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.64□□□□□ -1.67
HOXC6P09630 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXC6P09630 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.64□□□□□ -1.67
HOXC6P09630 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.64□□□□□ -1.67
HOXC6P09630 NANOGP10-201ENST00000453325 895 ntBASIC4.64□□□□□ -1.67
HOXC6P09630 AC107015.1-201ENST00000466902 747 ntBASIC4.64□□□□□ -1.67
HOXC6P09630 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXC6P09630 RPS3AP22-201ENST00000488297 769 ntBASIC4.64□□□□□ -1.67
HOXC6P09630 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HOXC6P09630 RPS27AP18-201ENST00000515536 459 ntBASIC4.64□□□□□ -1.67
HOXC6P09630 HIGD1AP18-201ENST00000520730 278 ntBASIC4.64□□□□□ -1.67
HOXC6P09630 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXC6P09630 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXC6P09630 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXC6P09630 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXC6P09630 AC023050.2-201ENST00000544968 387 ntBASIC4.64□□□□□ -1.67
HOXC6P09630 CYCSP30-201ENST00000546447 172 ntBASIC4.64□□□□□ -1.67
HOXC6P09630 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXC6P09630 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXC6P09630 FAM106CP-201ENST00000582212 507 ntBASIC4.64□□□□□ -1.67
HOXC6P09630 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.64□□□□□ -1.67
HOXC6P09630 AC012557.2-201ENST00000605919 418 ntBASIC4.64□□□□□ -1.67
HOXC6P09630 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HOXC6P09630 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.64□□□□□ -1.67
HOXC6P09630 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.64□□□□□ -1.67
HOXC6P09630 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXC6P09630 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXC6P09630 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.64□□□□□ -1.67
HOXC6P09630 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HOXC6P09630 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.64□□□□□ -1.67
HOXC6P09630 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HOXC6P09630 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HOXC6P09630 AL390862.1-201ENST00000635467 1469 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 ERCC6-202ENST00000374127 1782 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HOXC6P09630 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HOXC6P09630 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.63□□□□□ -1.67
HOXC6P09630 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.63□□□□□ -1.67
HOXC6P09630 RNU6-236P-201ENST00000363886 106 ntBASIC4.63□□□□□ -1.67
HOXC6P09630 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
HOXC6P09630 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms