Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 RNU4-92P-201ENST00000363783 136 ntBASIC4.1□□□□□ -1.75
CD48P09326 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CD48P09326 AC068538.1-201ENST00000376856 336 ntBASIC4.1□□□□□ -1.75
CD48P09326 AMD1P2-201ENST00000412936 992 ntBASIC4.1□□□□□ -1.75
CD48P09326 AC013404.1-201ENST00000413068 249 ntBASIC4.1□□□□□ -1.75
CD48P09326 VTA1P1-201ENST00000414044 866 ntBASIC4.1□□□□□ -1.75
CD48P09326 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.1□□□□□ -1.75
CD48P09326 C4BPAP2-201ENST00000428434 478 ntBASIC4.1□□□□□ -1.75
CD48P09326 NPM1P34-201ENST00000428821 893 ntBASIC4.1□□□□□ -1.75
CD48P09326 RPS6P15-201ENST00000431996 751 ntBASIC4.1□□□□□ -1.75
CD48P09326 AC091390.1-201ENST00000433904 331 ntBASIC4.1□□□□□ -1.75
CD48P09326 AC092170.1-201ENST00000440211 356 ntBASIC4.1□□□□□ -1.75
CD48P09326 MTCYBP42-201ENST00000444653 1130 ntBASIC4.1□□□□□ -1.75
CD48P09326 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.1□□□□□ -1.75
CD48P09326 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.1□□□□□ -1.75
CD48P09326 RPS17P13-201ENST00000448974 407 ntBASIC4.1□□□□□ -1.75
CD48P09326 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.1□□□□□ -1.75
CD48P09326 CDC42P1-201ENST00000456658 548 ntBASIC4.1□□□□□ -1.75
CD48P09326 AC107015.1-201ENST00000466902 747 ntBASIC4.1□□□□□ -1.75
CD48P09326 AC021205.1-201ENST00000468797 348 ntBASIC4.1□□□□□ -1.75
CD48P09326 NDUFA5P9-201ENST00000472609 340 ntBASIC4.1□□□□□ -1.75
CD48P09326 AC037198.2-201ENST00000478845 733 ntBASIC4.1□□□□□ -1.75
CD48P09326 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.1□□□□□ -1.75
CD48P09326 AC023050.1-201ENST00000498198 304 ntBASIC4.1□□□□□ -1.75
CD48P09326 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.1□□□□□ -1.75
CD48P09326 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.1□□□□□ -1.75
CD48P09326 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.1□□□□□ -1.75
CD48P09326 RNA5SP179-201ENST00000517284 121 ntBASIC4.1□□□□□ -1.75
CD48P09326 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CD48P09326 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.1□□□□□ -1.75
CD48P09326 YPEL5P3-201ENST00000547227 352 ntBASIC4.1□□□□□ -1.75
CD48P09326 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.1□□□□□ -1.75
CD48P09326 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.1□□□□□ -1.75
CD48P09326 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.1□□□□□ -1.75
CD48P09326 PCNAP1-202ENST00000595299 752 ntBASIC4.1□□□□□ -1.75
CD48P09326 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CD48P09326 AC091167.4-201ENST00000605079 184 ntBASIC4.1□□□□□ -1.75
CD48P09326 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CD48P09326 AL135786.2-201ENST00000608422 615 ntBASIC4.1□□□□□ -1.75
CD48P09326 AL591424.2-201ENST00000617023 128 ntBASIC4.1□□□□□ -1.75
CD48P09326 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CD48P09326 AC074140.1-201ENST00000621617 208 ntBASIC4.1□□□□□ -1.75
CD48P09326 AP002782.1-201ENST00000623107 614 ntBASIC4.1□□□□□ -1.75
CD48P09326 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CD48P09326 OR1S1-201ENST00000624470 978 ntBASIC4.1□□□□□ -1.75
CD48P09326 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.1□□□□□ -1.75
CD48P09326 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.1□□□□□ -1.75
CD48P09326 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CD48P09326 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.1□□□□□ -1.75
CD48P09326 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CD48P09326 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.1□□□□□ -1.75
CD48P09326 AC073055.1-201ENST00000456901 1621 ntBASIC4.1□□□□□ -1.75
CD48P09326 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CD48P09326 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD48P09326 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.09□□□□□ -1.75
CD48P09326 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.09□□□□□ -1.75
CD48P09326 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CD48P09326 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD48P09326 RNU1-87P-201ENST00000363727 170 ntBASIC4.09□□□□□ -1.75
CD48P09326 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.09□□□□□ -1.75
CD48P09326 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.09□□□□□ -1.75
CD48P09326 RNU6-224P-201ENST00000384055 107 ntBASIC4.09□□□□□ -1.75
CD48P09326 SNORD116-12-201ENST00000384468 92 ntBASIC4.09□□□□□ -1.75
CD48P09326 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CD48P09326 RNU6-1320P-201ENST00000390838 107 ntBASIC4.09□□□□□ -1.75
CD48P09326 RNU6-1269P-201ENST00000391139 107 ntBASIC4.09□□□□□ -1.75
CD48P09326 AL022722.2-201ENST00000402519 180 ntBASIC4.09□□□□□ -1.75
CD48P09326 AL034374.1-201ENST00000406329 351 ntBASIC4.09□□□□□ -1.75
CD48P09326 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.09□□□□□ -1.75
CD48P09326 RNA5SP317-201ENST00000410176 116 ntBASIC4.09□□□□□ -1.75
CD48P09326 RNA5SP311-201ENST00000411290 116 ntBASIC4.09□□□□□ -1.75
CD48P09326 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.09□□□□□ -1.75
CD48P09326 COX6CP17-201ENST00000421389 185 ntBASIC4.09□□□□□ -1.75
CD48P09326 AC246680.2-201ENST00000422106 389 ntBASIC4.09□□□□□ -1.75
CD48P09326 AC010099.3-201ENST00000423896 409 ntBASIC4.09□□□□□ -1.75
CD48P09326 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.09□□□□□ -1.75
CD48P09326 AL691449.1-201ENST00000426570 421 ntBASIC4.09□□□□□ -1.75
CD48P09326 HIGD1AP4-201ENST00000430194 280 ntBASIC4.09□□□□□ -1.75
CD48P09326 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.09□□□□□ -1.75
CD48P09326 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.09□□□□□ -1.75
CD48P09326 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.09□□□□□ -1.75
CD48P09326 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.09□□□□□ -1.75
CD48P09326 HMGB1P37-201ENST00000439613 609 ntBASIC4.09□□□□□ -1.75
CD48P09326 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.09□□□□□ -1.75
CD48P09326 AL356535.1-201ENST00000440335 398 ntBASIC4.09□□□□□ -1.75
CD48P09326 RANP8-201ENST00000444720 713 ntBASIC4.09□□□□□ -1.75
CD48P09326 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.09□□□□□ -1.75
CD48P09326 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.09□□□□□ -1.75
CD48P09326 RNU6-599P-201ENST00000459383 107 ntBASIC4.09□□□□□ -1.75
CD48P09326 RNU6-1193P-201ENST00000459461 107 ntBASIC4.09□□□□□ -1.75
CD48P09326 AP000563.1-201ENST00000490865 758 ntBASIC4.09□□□□□ -1.75
CD48P09326 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.09□□□□□ -1.75
CD48P09326 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.09□□□□□ -1.75
CD48P09326 RNA5SP315-201ENST00000516340 116 ntBASIC4.09□□□□□ -1.75
CD48P09326 RNA5SP312-201ENST00000517068 116 ntBASIC4.09□□□□□ -1.75
CD48P09326 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.09□□□□□ -1.75
CD48P09326 AC087369.1-201ENST00000520775 996 ntBASIC4.09□□□□□ -1.75
CD48P09326 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.09□□□□□ -1.75
CD48P09326 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CD48P09326 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms