Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.23□□□□□ -1.73
COL2A1P02458 MTND2P8-201ENST00000450555 1025 ntBASIC4.23□□□□□ -1.73
COL2A1P02458 AC096992.1-201ENST00000459808 709 ntBASIC4.23□□□□□ -1.73
COL2A1P02458 RN7SL809P-201ENST00000482040 297 ntBASIC4.23□□□□□ -1.73
COL2A1P02458 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.23□□□□□ -1.73
COL2A1P02458 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.23□□□□□ -1.73
COL2A1P02458 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.23□□□□□ -1.73
COL2A1P02458 HIGD1AP18-201ENST00000520730 278 ntBASIC4.23□□□□□ -1.73
COL2A1P02458 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.23□□□□□ -1.73
COL2A1P02458 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.23□□□□□ -1.73
COL2A1P02458 AC023538.1-201ENST00000534576 736 ntBASIC4.23□□□□□ -1.73
COL2A1P02458 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.23□□□□□ -1.73
COL2A1P02458 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.23□□□□□ -1.73
COL2A1P02458 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.23□□□□□ -1.73
COL2A1P02458 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.23□□□□□ -1.73
COL2A1P02458 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.23□□□□□ -1.73
COL2A1P02458 MIR4325-201ENST00000583049 90 ntBASIC4.23□□□□□ -1.73
COL2A1P02458 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL2A1P02458 EIF1P6-201ENST00000600054 334 ntBASIC4.23□□□□□ -1.73
COL2A1P02458 MTCO3P22-201ENST00000603219 784 ntBASIC4.23□□□□□ -1.73
COL2A1P02458 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL2A1P02458 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.23□□□□□ -1.73
COL2A1P02458 AL355493.4-201ENST00000618530 292 ntBASIC4.23□□□□□ -1.73
COL2A1P02458 AL513185.3-201ENST00000433335 1300 ntBASIC4.23□□□□□ -1.73
COL2A1P02458 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.22□□□□□ -1.73
COL2A1P02458 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL2A1P02458 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL2A1P02458 AL355596.1-201ENST00000565399 3996 ntBASIC4.22□□□□□ -1.73
COL2A1P02458 AC090337.1-201ENST00000579651 2074 ntBASIC4.22□□□□□ -1.73
COL2A1P02458 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL2A1P02458 AC068254.2-201ENST00000623938 3577 ntBASIC4.22□□□□□ -1.73
COL2A1P02458 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
COL2A1P02458 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.22□□□□□ -1.73
COL2A1P02458 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
COL2A1P02458 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
COL2A1P02458 RNY3P9-201ENST00000384727 106 ntBASIC4.22□□□□□ -1.73
COL2A1P02458 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.22□□□□□ -1.73
COL2A1P02458 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.22□□□□□ -1.73
COL2A1P02458 U3.39-201ENST00000408569 239 ntBASIC4.22□□□□□ -1.73
COL2A1P02458 RNA5SP120-201ENST00000410900 112 ntBASIC4.22□□□□□ -1.73
COL2A1P02458 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.22□□□□□ -1.73
COL2A1P02458 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.22□□□□□ -1.73
COL2A1P02458 OSTCP5-201ENST00000425293 453 ntBASIC4.22□□□□□ -1.73
COL2A1P02458 AC092648.1-201ENST00000425870 423 ntBASIC4.22□□□□□ -1.73
COL2A1P02458 RPL12P46-201ENST00000436610 195 ntBASIC4.22□□□□□ -1.73
COL2A1P02458 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
COL2A1P02458 MRPL35P4-201ENST00000453682 566 ntBASIC4.22□□□□□ -1.73
COL2A1P02458 AC104629.2-201ENST00000468627 598 ntBASIC4.22□□□□□ -1.73
COL2A1P02458 AP000563.1-201ENST00000490865 758 ntBASIC4.22□□□□□ -1.73
COL2A1P02458 AC093663.1-201ENST00000497190 394 ntBASIC4.22□□□□□ -1.73
COL2A1P02458 AP001960.1-201ENST00000506494 658 ntBASIC4.22□□□□□ -1.73
COL2A1P02458 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.22□□□□□ -1.73
COL2A1P02458 RNU4-18P-201ENST00000516751 149 ntBASIC4.22□□□□□ -1.73
COL2A1P02458 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.22□□□□□ -1.73
COL2A1P02458 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.22□□□□□ -1.73
COL2A1P02458 MTCO1P47-201ENST00000523889 1271 ntBASIC4.22□□□□□ -1.73
COL2A1P02458 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.22□□□□□ -1.73
COL2A1P02458 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.22□□□□□ -1.73
COL2A1P02458 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.22□□□□□ -1.73
COL2A1P02458 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.22□□□□□ -1.73
COL2A1P02458 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.22□□□□□ -1.73
COL2A1P02458 AC006272.2-201ENST00000594725 163 ntBASIC4.22□□□□□ -1.73
COL2A1P02458 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.22□□□□□ -1.73
COL2A1P02458 AL138955.1-201ENST00000622881 1040 ntBASIC4.22□□□□□ -1.73
COL2A1P02458 AC026422.1-201ENST00000623961 452 ntBASIC4.22□□□□□ -1.73
COL2A1P02458 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.22□□□□□ -1.73
COL2A1P02458 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL2A1P02458 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
COL2A1P02458 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
COL2A1P02458 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.21□□□□□ -1.73
COL2A1P02458 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.21□□□□□ -1.73
COL2A1P02458 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.21□□□□□ -1.74
COL2A1P02458 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL2A1P02458 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL2A1P02458 SNORD17-201ENST00000390930 237 ntBASIC4.21□□□□□ -1.74
COL2A1P02458 SNORA48.5-201ENST00000391143 135 ntBASIC4.21□□□□□ -1.74
COL2A1P02458 AL035405.1-201ENST00000400795 710 ntBASIC4.21□□□□□ -1.74
COL2A1P02458 RNA5SP104-201ENST00000410989 118 ntBASIC4.21□□□□□ -1.74
COL2A1P02458 DPPA2P2-201ENST00000418220 897 ntBASIC4.21□□□□□ -1.74
COL2A1P02458 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.21□□□□□ -1.74
COL2A1P02458 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.21□□□□□ -1.74
COL2A1P02458 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.21□□□□□ -1.74
COL2A1P02458 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.21□□□□□ -1.74
COL2A1P02458 AC092447.2-201ENST00000435487 669 ntBASIC4.21□□□□□ -1.74
COL2A1P02458 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.21□□□□□ -1.74
COL2A1P02458 MTND2P30-201ENST00000456663 382 ntBASIC4.21□□□□□ -1.74
COL2A1P02458 MTCO2P6-201ENST00000463134 685 ntBASIC4.21□□□□□ -1.74
COL2A1P02458 AC108729.2-201ENST00000476543 840 ntBASIC4.21□□□□□ -1.74
COL2A1P02458 FTH1P24-201ENST00000503502 462 ntBASIC4.21□□□□□ -1.74
COL2A1P02458 AC139783.2-201ENST00000504847 1145 ntBASIC4.21□□□□□ -1.74
COL2A1P02458 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.21□□□□□ -1.74
COL2A1P02458 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.21□□□□□ -1.74
COL2A1P02458 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.21□□□□□ -1.74
COL2A1P02458 AL121766.1-201ENST00000547436 487 ntBASIC4.21□□□□□ -1.74
COL2A1P02458 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.21□□□□□ -1.74
COL2A1P02458 YWHAZP1-201ENST00000556286 722 ntBASIC4.21□□□□□ -1.74
COL2A1P02458 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.21□□□□□ -1.74
COL2A1P02458 MIR4672-201ENST00000583126 81 ntBASIC4.21□□□□□ -1.74
COL2A1P02458 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.21□□□□□ -1.74
COL2A1P02458 MTCO2P2-201ENST00000591258 225 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms