Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN9O95484 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CLDN9O95484 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.65□□□□□ -1.82
CLDN9O95484 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CLDN9O95484 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CLDN9O95484 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.65□□□□□ -1.82
CLDN9O95484 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.65□□□□□ -1.82
CLDN9O95484 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CLDN9O95484 ZNF33CP-201ENST00000432492 2030 ntBASIC3.65□□□□□ -1.82
CLDN9O95484 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.65□□□□□ -1.82
CLDN9O95484 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.65□□□□□ -1.82
CLDN9O95484 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.65□□□□□ -1.82
CLDN9O95484 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.65□□□□□ -1.82
CLDN9O95484 MTCO1P18-201ENST00000455518 1419 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 AC007685.1-201ENST00000329806 452 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 RNU6-543P-201ENST00000362576 108 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 U1.1-201ENST00000384101 164 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 RNU6-796P-201ENST00000391086 107 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.65□□□□□ -1.83
CLDN9O95484 AC025750.1-201ENST00000399891 379 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 SNORA3.3-201ENST00000408712 125 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 FAM204CP-201ENST00000424489 642 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.65□□□□□ -1.83
CLDN9O95484 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN9O95484 HSFY6P-201ENST00000445573 403 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 OR9M1P-201ENST00000459641 921 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 AC087385.1-201ENST00000475062 312 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 AC073522.1-201ENST00000483312 377 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 AC008565.1-201ENST00000509046 885 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN9O95484 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN9O95484 IGKV2D-23-201ENST00000518179 286 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN9O95484 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN9O95484 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN9O95484 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN9O95484 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.65□□□□□ -1.83
CLDN9O95484 AL442163.2-201ENST00000553912 710 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.65□□□□□ -1.83
CLDN9O95484 AC006960.3-201ENST00000561845 705 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 AC090312.2-201ENST00000582687 378 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.65□□□□□ -1.83
CLDN9O95484 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN9O95484 AC125494.3-201ENST00000602759 455 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 SNORA62.6-201ENST00000606322 83 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN9O95484 STMN1P1-201ENST00000617809 440 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
CLDN9O95484 AC079684.1-201ENST00000621405 437 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 AC006065.5-201ENST00000623427 349 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 HPVC1-201ENST00000629899 1198 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 AC244205.2-202ENST00000635781 342 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 AL163152.1-201ENST00000642001 374 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN9O95484 AC104446.1-201ENST00000613728 1321 ntBASIC3.65□□□□□ -1.83
CLDN9O95484 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN9O95484 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.64□□□□□ -1.83
CLDN9O95484 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLDN9O95484 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.64□□□□□ -1.83
CLDN9O95484 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CLDN9O95484 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLDN9O95484 RNA5SP283-201ENST00000365604 119 ntBASIC3.64□□□□□ -1.83
CLDN9O95484 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.64□□□□□ -1.83
CLDN9O95484 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CLDN9O95484 RNA5SP424-201ENST00000390988 115 ntBASIC3.64□□□□□ -1.83
CLDN9O95484 DNAJC19P6-201ENST00000401853 280 ntBASIC3.64□□□□□ -1.83
CLDN9O95484 RN7SKP263-201ENST00000411194 309 ntBASIC3.64□□□□□ -1.83
CLDN9O95484 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.64□□□□□ -1.83
CLDN9O95484 RPS15AP40-201ENST00000419621 391 ntBASIC3.64□□□□□ -1.83
CLDN9O95484 AC092832.1-201ENST00000422934 400 ntBASIC3.64□□□□□ -1.83
CLDN9O95484 AL390879.2-203ENST00000426943 1121 ntBASIC3.64□□□□□ -1.83
CLDN9O95484 SKP1P1-201ENST00000438081 489 ntBASIC3.64□□□□□ -1.83
CLDN9O95484 AC122718.1-201ENST00000439448 744 ntBASIC3.64□□□□□ -1.83
CLDN9O95484 RPL21P89-201ENST00000444021 467 ntBASIC3.64□□□□□ -1.83
CLDN9O95484 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.64□□□□□ -1.83
CLDN9O95484 EXTL2P1-201ENST00000446218 416 ntBASIC3.64□□□□□ -1.83
CLDN9O95484 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.64□□□□□ -1.83
CLDN9O95484 FAM133DP-201ENST00000464802 691 ntBASIC3.64□□□□□ -1.83
CLDN9O95484 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.64□□□□□ -1.83
CLDN9O95484 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.64□□□□□ -1.83
CLDN9O95484 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.64□□□□□ -1.83
CLDN9O95484 IGKV2-23-201ENST00000518729 323 ntBASIC3.64□□□□□ -1.83
CLDN9O95484 AC091515.1-201ENST00000548110 679 ntBASIC3.64□□□□□ -1.83
CLDN9O95484 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.64□□□□□ -1.83
CLDN9O95484 LINC00557-201ENST00000563184 1279 ntBASIC3.64□□□□□ -1.83
CLDN9O95484 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.64□□□□□ -1.83
CLDN9O95484 MIR3160-1-201ENST00000577972 85 ntBASIC3.64□□□□□ -1.83
CLDN9O95484 AL163642.2-201ENST00000604722 1019 ntBASIC3.64□□□□□ -1.83
CLDN9O95484 KATNBL1P5-201ENST00000605015 517 ntBASIC3.64□□□□□ -1.83
CLDN9O95484 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.64□□□□□ -1.83
CLDN9O95484 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.64□□□□□ -1.83
CLDN9O95484 AC024595.1-201ENST00000623088 387 ntBASIC3.64□□□□□ -1.83
CLDN9O95484 AC106871.1-201ENST00000568324 3102 ntBASIC3.64□□□□□ -1.83
CLDN9O95484 NMD3P1-201ENST00000439704 1488 ntBASIC3.64□□□□□ -1.83
CLDN9O95484 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CLDN9O95484 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.64□□□□□ -1.83
CLDN9O95484 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLDN9O95484 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLDN9O95484 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.63□□□□□ -1.83
CLDN9O95484 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms