Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC109315.1-201ENST00000584143 1347 ntBASIC4.06□□□□□ -1.76
SSX4O60224 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSX4O60224 RNU6-560P-201ENST00000364007 108 ntBASIC4.06□□□□□ -1.76
SSX4O60224 RNU4-28P-201ENST00000364739 141 ntBASIC4.06□□□□□ -1.76
SSX4O60224 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSX4O60224 SUGT1P1-201ENST00000379514 476 ntBASIC4.06□□□□□ -1.76
SSX4O60224 RNU6-441P-201ENST00000384545 106 ntBASIC4.06□□□□□ -1.76
SSX4O60224 AL049693.1-201ENST00000402760 611 ntBASIC4.06□□□□□ -1.76
SSX4O60224 AL356967.1-201ENST00000406305 431 ntBASIC4.06□□□□□ -1.76
SSX4O60224 RPL23AP47-201ENST00000408017 460 ntBASIC4.06□□□□□ -1.76
SSX4O60224 RNU2-42P-201ENST00000410697 113 ntBASIC4.06□□□□□ -1.76
SSX4O60224 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.06□□□□□ -1.76
SSX4O60224 RPL22P18-201ENST00000417197 377 ntBASIC4.06□□□□□ -1.76
SSX4O60224 AC092634.6-201ENST00000418558 192 ntBASIC4.06□□□□□ -1.76
SSX4O60224 RPS15AP40-201ENST00000419621 391 ntBASIC4.06□□□□□ -1.76
SSX4O60224 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.06□□□□□ -1.76
SSX4O60224 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.06□□□□□ -1.76
SSX4O60224 OR4F13P-201ENST00000428478 931 ntBASIC4.06□□□□□ -1.76
SSX4O60224 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.06□□□□□ -1.76
SSX4O60224 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.06□□□□□ -1.76
SSX4O60224 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.06□□□□□ -1.76
SSX4O60224 RPS26P56-201ENST00000444468 240 ntBASIC4.06□□□□□ -1.76
SSX4O60224 AL591719.1-201ENST00000444669 744 ntBASIC4.06□□□□□ -1.76
SSX4O60224 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.06□□□□□ -1.76
SSX4O60224 AL034418.1-201ENST00000448675 860 ntBASIC4.06□□□□□ -1.76
SSX4O60224 AC079804.1-201ENST00000461922 436 ntBASIC4.06□□□□□ -1.76
SSX4O60224 AC010307.1-201ENST00000467206 836 ntBASIC4.06□□□□□ -1.76
SSX4O60224 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.06□□□□□ -1.76
SSX4O60224 AC087879.1-201ENST00000474343 374 ntBASIC4.06□□□□□ -1.76
SSX4O60224 AC108022.1-201ENST00000493466 478 ntBASIC4.06□□□□□ -1.76
SSX4O60224 PRELID3BP7-201ENST00000503606 469 ntBASIC4.06□□□□□ -1.76
SSX4O60224 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.06□□□□□ -1.76
SSX4O60224 AC091951.3-201ENST00000504093 246 ntBASIC4.06□□□□□ -1.76
SSX4O60224 SNX5P1-201ENST00000505757 1041 ntBASIC4.06□□□□□ -1.76
SSX4O60224 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.06□□□□□ -1.76
SSX4O60224 RNA5SP497-201ENST00000516081 97 ntBASIC4.06□□□□□ -1.76
SSX4O60224 SNORA48.10-201ENST00000516965 160 ntBASIC4.06□□□□□ -1.76
SSX4O60224 AP001189.2-201ENST00000527320 189 ntBASIC4.06□□□□□ -1.76
SSX4O60224 AP000790.1-201ENST00000528891 737 ntBASIC4.06□□□□□ -1.76
SSX4O60224 MTCO2P15-201ENST00000532655 656 ntBASIC4.06□□□□□ -1.76
SSX4O60224 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.06□□□□□ -1.76
SSX4O60224 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.06□□□□□ -1.76
SSX4O60224 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SSX4O60224 AL161713.1-201ENST00000555538 145 ntBASIC4.06□□□□□ -1.76
SSX4O60224 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.06□□□□□ -1.76
SSX4O60224 AGGF1P8-201ENST00000562979 1000 ntBASIC4.06□□□□□ -1.76
SSX4O60224 MTCYBP28-201ENST00000566728 1132 ntBASIC4.06□□□□□ -1.76
SSX4O60224 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.06□□□□□ -1.76
SSX4O60224 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.06□□□□□ -1.76
SSX4O60224 AC107952.2-201ENST00000606048 486 ntBASIC4.06□□□□□ -1.76
SSX4O60224 AC026368.1-201ENST00000614934 690 ntBASIC4.06□□□□□ -1.76
SSX4O60224 AC006338.2-201ENST00000616864 791 ntBASIC4.06□□□□□ -1.76
SSX4O60224 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.06□□□□□ -1.76
SSX4O60224 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.06□□□□□ -1.76
SSX4O60224 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SSX4O60224 AC139713.2-214ENST00000642059 1811 ntBASIC4.06□□□□□ -1.76
SSX4O60224 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.06□□□□□ -1.76
SSX4O60224 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSX4O60224 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SSX4O60224 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSX4O60224 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SSX4O60224 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSX4O60224 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SSX4O60224 AC012020.1-201ENST00000624541 1728 ntBASIC4.05□□□□□ -1.76
SSX4O60224 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSX4O60224 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SSX4O60224 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSX4O60224 RNU6-251P-201ENST00000363235 104 ntBASIC4.05□□□□□ -1.76
SSX4O60224 RNU1-85P-201ENST00000364127 164 ntBASIC4.05□□□□□ -1.76
SSX4O60224 SNORA70.2-201ENST00000364506 135 ntBASIC4.05□□□□□ -1.76
SSX4O60224 Y_RNA.465-201ENST00000384293 102 ntBASIC4.05□□□□□ -1.76
SSX4O60224 RNU6-921P-201ENST00000384361 107 ntBASIC4.05□□□□□ -1.76
SSX4O60224 AL049697.2-201ENST00000403708 294 ntBASIC4.05□□□□□ -1.76
SSX4O60224 ZNF603P-201ENST00000405613 487 ntBASIC4.05□□□□□ -1.76
SSX4O60224 NRBF2P2-201ENST00000413087 861 ntBASIC4.05□□□□□ -1.76
SSX4O60224 HMGB1P49-201ENST00000418882 569 ntBASIC4.05□□□□□ -1.76
SSX4O60224 MTCO3P1-205ENST00000422088 832 ntBASIC4.05□□□□□ -1.76
SSX4O60224 RPL21P91-201ENST00000429231 479 ntBASIC4.05□□□□□ -1.76
SSX4O60224 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.05□□□□□ -1.76
SSX4O60224 AC241584.1-201ENST00000438469 1241 ntBASIC4.05□□□□□ -1.76
SSX4O60224 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SSX4O60224 TPTE2P3-201ENST00000441562 1189 ntBASIC4.05□□□□□ -1.76
SSX4O60224 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.05□□□□□ -1.76
SSX4O60224 AL672167.3-201ENST00000465951 960 ntBASIC4.05□□□□□ -1.76
SSX4O60224 AC013356.1-201ENST00000489027 564 ntBASIC4.05□□□□□ -1.76
SSX4O60224 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.05□□□□□ -1.76
SSX4O60224 AC025445.1-201ENST00000502728 300 ntBASIC4.05□□□□□ -1.76
SSX4O60224 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.05□□□□□ -1.76
SSX4O60224 SCARNA22-201ENST00000503991 125 ntBASIC4.05□□□□□ -1.76
SSX4O60224 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.05□□□□□ -1.76
SSX4O60224 AC118282.1-201ENST00000506408 765 ntBASIC4.05□□□□□ -1.76
SSX4O60224 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.05□□□□□ -1.76
SSX4O60224 VWA8P1-201ENST00000510889 176 ntBASIC4.05□□□□□ -1.76
SSX4O60224 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.05□□□□□ -1.76
SSX4O60224 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.05□□□□□ -1.76
SSX4O60224 AC112673.1-201ENST00000513168 575 ntBASIC4.05□□□□□ -1.76
SSX4O60224 HNRNPKP5-201ENST00000515300 253 ntBASIC4.05□□□□□ -1.76
SSX4O60224 RNU6-1225P-201ENST00000516336 65 ntBASIC4.05□□□□□ -1.76
SSX4O60224 Y_RNA.719-201ENST00000517156 106 ntBASIC4.05□□□□□ -1.76
SSX4O60224 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms