Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.39□□□□□ -1.71
LDB2O43679 RPS27AP7-201ENST00000422792 455 ntBASIC4.39□□□□□ -1.71
LDB2O43679 TMSB4XP1-201ENST00000424567 135 ntBASIC4.39□□□□□ -1.71
LDB2O43679 SKP1P3-201ENST00000429280 487 ntBASIC4.39□□□□□ -1.71
LDB2O43679 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.39□□□□□ -1.71
LDB2O43679 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.39□□□□□ -1.71
LDB2O43679 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.39□□□□□ -1.71
LDB2O43679 UBE2D3P4-201ENST00000441973 436 ntBASIC4.39□□□□□ -1.71
LDB2O43679 AC118469.1-201ENST00000442943 488 ntBASIC4.39□□□□□ -1.71
LDB2O43679 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.39□□□□□ -1.71
LDB2O43679 MTND2P4-201ENST00000445034 1004 ntBASIC4.39□□□□□ -1.71
LDB2O43679 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.39□□□□□ -1.71
LDB2O43679 RPS23P7-201ENST00000466210 444 ntBASIC4.39□□□□□ -1.71
LDB2O43679 BZW1P2-201ENST00000473537 826 ntBASIC4.39□□□□□ -1.71
LDB2O43679 RPL7P18-201ENST00000478965 734 ntBASIC4.39□□□□□ -1.71
LDB2O43679 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.39□□□□□ -1.71
LDB2O43679 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.39□□□□□ -1.71
LDB2O43679 AC026979.1-201ENST00000492525 396 ntBASIC4.39□□□□□ -1.71
LDB2O43679 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.39□□□□□ -1.71
LDB2O43679 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.39□□□□□ -1.71
LDB2O43679 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.39□□□□□ -1.71
LDB2O43679 AC021146.8-201ENST00000507455 733 ntBASIC4.39□□□□□ -1.71
LDB2O43679 ATP1B1P1-201ENST00000509767 915 ntBASIC4.39□□□□□ -1.71
LDB2O43679 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.39□□□□□ -1.71
LDB2O43679 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.39□□□□□ -1.71
LDB2O43679 COX6B1P6-201ENST00000522347 255 ntBASIC4.39□□□□□ -1.71
LDB2O43679 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.39□□□□□ -1.71
LDB2O43679 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.39□□□□□ -1.71
LDB2O43679 AC068831.4-201ENST00000556118 109 ntBASIC4.39□□□□□ -1.71
LDB2O43679 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.39□□□□□ -1.71
LDB2O43679 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.39□□□□□ -1.71
LDB2O43679 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LDB2O43679 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.39□□□□□ -1.71
LDB2O43679 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.39□□□□□ -1.71
LDB2O43679 AP005136.1-201ENST00000579765 429 ntBASIC4.39□□□□□ -1.71
LDB2O43679 VN1R84P-201ENST00000593697 235 ntBASIC4.39□□□□□ -1.71
LDB2O43679 DUXAP11-201ENST00000603858 526 ntBASIC4.39□□□□□ -1.71
LDB2O43679 AP003973.1-201ENST00000604639 691 ntBASIC4.39□□□□□ -1.71
LDB2O43679 AC124312.4-201ENST00000605533 310 ntBASIC4.39□□□□□ -1.71
LDB2O43679 AP004247.3-201ENST00000608682 624 ntBASIC4.39□□□□□ -1.71
LDB2O43679 AC122108.2-201ENST00000611946 526 ntBASIC4.39□□□□□ -1.71
LDB2O43679 AL121873.1-201ENST00000616013 524 ntBASIC4.39□□□□□ -1.71
LDB2O43679 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
LDB2O43679 AL138721.1-201ENST00000616756 179 ntBASIC4.39□□□□□ -1.71
LDB2O43679 AC009704.2-201ENST00000618739 483 ntBASIC4.39□□□□□ -1.71
LDB2O43679 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.39□□□□□ -1.71
LDB2O43679 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.39□□□□□ -1.71
LDB2O43679 AC068620.4-201ENST00000636730 1182 ntBASIC4.39□□□□□ -1.71
LDB2O43679 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LDB2O43679 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
LDB2O43679 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LDB2O43679 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LDB2O43679 DCAF13P3-201ENST00000561147 1334 ntBASIC4.39□□□□□ -1.71
LDB2O43679 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LDB2O43679 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LDB2O43679 NOL8P1-201ENST00000508336 3529 ntBASIC4.39□□□□□ -1.71
LDB2O43679 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
LDB2O43679 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.38□□□□□ -1.71
LDB2O43679 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LDB2O43679 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LDB2O43679 OR5P1P-201ENST00000299512 925 ntBASIC4.38□□□□□ -1.71
LDB2O43679 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.38□□□□□ -1.71
LDB2O43679 AC097374.1-203ENST00000400783 485 ntBASIC4.38□□□□□ -1.71
LDB2O43679 FABP12P1-201ENST00000401911 322 ntBASIC4.38□□□□□ -1.71
LDB2O43679 AL512430.2-201ENST00000406786 339 ntBASIC4.38□□□□□ -1.71
LDB2O43679 VN1R8P-201ENST00000407739 893 ntBASIC4.38□□□□□ -1.71
LDB2O43679 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LDB2O43679 MIR1911-201ENST00000410783 80 ntBASIC4.38□□□□□ -1.71
LDB2O43679 RNU2-6P-201ENST00000411404 190 ntBASIC4.38□□□□□ -1.71
LDB2O43679 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LDB2O43679 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.38□□□□□ -1.71
LDB2O43679 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.38□□□□□ -1.71
LDB2O43679 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.38□□□□□ -1.71
LDB2O43679 ZNF885P-201ENST00000420174 1098 ntBASIC4.38□□□□□ -1.71
LDB2O43679 PDSS1P1-201ENST00000422953 1114 ntBASIC4.38□□□□□ -1.71
LDB2O43679 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.38□□□□□ -1.71
LDB2O43679 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.38□□□□□ -1.71
LDB2O43679 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.38□□□□□ -1.71
LDB2O43679 SEPT7P5-201ENST00000434048 306 ntBASIC4.38□□□□□ -1.71
LDB2O43679 PPIAP17-201ENST00000438507 471 ntBASIC4.38□□□□□ -1.71
LDB2O43679 MTCYBP3-201ENST00000445588 1137 ntBASIC4.38□□□□□ -1.71
LDB2O43679 AL606662.1-201ENST00000445763 553 ntBASIC4.38□□□□□ -1.71
LDB2O43679 PTMAP3-201ENST00000447474 330 ntBASIC4.38□□□□□ -1.71
LDB2O43679 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.38□□□□□ -1.71
LDB2O43679 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.38□□□□□ -1.71
LDB2O43679 TPTE2P5-203ENST00000458118 728 ntBASIC4.38□□□□□ -1.71
LDB2O43679 RPL31P3-201ENST00000458430 332 ntBASIC4.38□□□□□ -1.71
LDB2O43679 RPL35AP15-201ENST00000468042 339 ntBASIC4.38□□□□□ -1.71
LDB2O43679 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.38□□□□□ -1.71
LDB2O43679 MTND3P7-201ENST00000474435 343 ntBASIC4.38□□□□□ -1.71
LDB2O43679 AC015724.1-201ENST00000478577 156 ntBASIC4.38□□□□□ -1.71
LDB2O43679 RPL21P6-201ENST00000479171 504 ntBASIC4.38□□□□□ -1.71
LDB2O43679 ARL4AP1-201ENST00000503220 705 ntBASIC4.38□□□□□ -1.71
LDB2O43679 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LDB2O43679 AC091435.1-201ENST00000505442 584 ntBASIC4.38□□□□□ -1.71
LDB2O43679 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.38□□□□□ -1.71
LDB2O43679 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.38□□□□□ -1.71
LDB2O43679 AC093840.1-201ENST00000511599 336 ntBASIC4.38□□□□□ -1.71
LDB2O43679 AC010587.2-201ENST00000511727 448 ntBASIC4.38□□□□□ -1.71
LDB2O43679 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms