Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC108941.1-201ENST00000502853 530 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 MRPS33P2-201ENST00000507850 322 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.83□□□□□ -1.64
PHGDHO43175 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.83□□□□□ -1.64
PHGDHO43175 RNA5SP464-201ENST00000516251 108 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 RNA5SP392-201ENST00000516905 112 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.83□□□□□ -1.64
PHGDHO43175 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.83□□□□□ -1.64
PHGDHO43175 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.83□□□□□ -1.64
PHGDHO43175 OR4A45P-201ENST00000529954 901 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.83□□□□□ -1.64
PHGDHO43175 GTF2IP22-201ENST00000554443 182 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 AL390334.1-201ENST00000556395 450 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.83□□□□□ -1.64
PHGDHO43175 PCMTD1P2-201ENST00000565017 355 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PHGDHO43175 TVP23CP2-201ENST00000571473 623 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.83□□□□□ -1.64
PHGDHO43175 AP001004.1-201ENST00000582468 324 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.83□□□□□ -1.64
PHGDHO43175 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.83□□□□□ -1.64
PHGDHO43175 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.83□□□□□ -1.64
PHGDHO43175 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
PHGDHO43175 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.83□□□□□ -1.64
PHGDHO43175 AC073544.2-201ENST00000601155 540 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 MEMO1P5-201ENST00000604810 406 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 AC012557.2-201ENST00000605919 418 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.83□□□□□ -1.64
PHGDHO43175 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.83□□□□□ -1.64
PHGDHO43175 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.83□□□□□ -1.64
PHGDHO43175 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PHGDHO43175 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PHGDHO43175 AC139713.2-215ENST00000641428 5037 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 ASNSP1-201ENST00000518311 1939 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PHGDHO43175 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PHGDHO43175 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.83□□□□□ -1.64
PHGDHO43175 AL031985.3-201ENST00000565390 2449 ntBASIC4.83□□□□□ -1.64
PHGDHO43175 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PHGDHO43175 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PHGDHO43175 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PHGDHO43175 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.82□□□□□ -1.64
PHGDHO43175 AL592148.3-201ENST00000608771 2646 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 MTND4P16-201ENST00000466108 1367 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.82□□□□□ -1.64
PHGDHO43175 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
PHGDHO43175 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
PHGDHO43175 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.82□□□□□ -1.64
PHGDHO43175 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PHGDHO43175 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PHGDHO43175 RNU4-21P-201ENST00000362802 126 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 RNU6-623P-201ENST00000363143 105 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 MIR223-201ENST00000385204 110 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PHGDHO43175 U3.35-201ENST00000408405 208 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 RN7SKP273-201ENST00000411392 314 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 ATG4AP1-201ENST00000416893 538 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.82□□□□□ -1.64
PHGDHO43175 MTCO3P5-201ENST00000433620 714 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.82□□□□□ -1.64
PHGDHO43175 AL512286.1-201ENST00000439244 400 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 CNOT7P2-201ENST00000441051 832 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.82□□□□□ -1.64
PHGDHO43175 COX6CP2-201ENST00000444980 225 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.82□□□□□ -1.64
PHGDHO43175 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PHGDHO43175 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.82□□□□□ -1.64
PHGDHO43175 RNU7-136P-201ENST00000458819 69 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 AC116337.2-201ENST00000477662 156 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 HMGB1P21-201ENST00000502313 581 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 AC010424.1-201ENST00000506336 297 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.82□□□□□ -1.64
PHGDHO43175 MTND4P2-201ENST00000507767 1203 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.82□□□□□ -1.64
PHGDHO43175 MTND5P4-201ENST00000514978 288 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 Y_RNA.719-201ENST00000517156 106 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 RNU6-709P-201ENST00000517257 104 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.82□□□□□ -1.64
PHGDHO43175 HMGB1P19-201ENST00000517578 577 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.82□□□□□ -1.64
PHGDHO43175 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.82□□□□□ -1.64
PHGDHO43175 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PHGDHO43175 AC092490.3-201ENST00000545370 572 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 AC090022.1-201ENST00000546569 311 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.82□□□□□ -1.64
PHGDHO43175 AL049839.1-201ENST00000556151 657 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 MIR4489-201ENST00000578869 62 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 SNORA74C-1-201ENST00000580726 201 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 AC103987.3-201ENST00000582071 292 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 AC011447.4-201ENST00000587562 111 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.82□□□□□ -1.64
PHGDHO43175 RSL24D1P11-201ENST00000591045 491 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 AC012360.2-201ENST00000609349 391 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 AC000123.2-201ENST00000623124 461 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.82□□□□□ -1.64
PHGDHO43175 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PHGDHO43175 THAP12P4-201ENST00000528321 2266 ntBASIC4.82□□□□□ -1.64
PHGDHO43175 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.82□□□□□ -1.64
PHGDHO43175 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms