Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC005726.1-201ENST00000494679 427 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
FOXN3O00409 AC083829.1-201ENST00000503756 657 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.96□□□□□ -1.62
FOXN3O00409 ATP1B1P1-201ENST00000509767 915 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 HSPE1P23-201ENST00000509838 286 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.96□□□□□ -1.62
FOXN3O00409 OR7H2P-201ENST00000513483 306 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 HNRNPKP5-201ENST00000515300 253 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 Y_RNA.688-201ENST00000516565 95 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.96□□□□□ -1.62
FOXN3O00409 AP001922.4-201ENST00000526967 290 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 BRD9P1-201ENST00000529855 560 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.96□□□□□ -1.62
FOXN3O00409 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.96□□□□□ -1.62
FOXN3O00409 AL110118.1-201ENST00000553543 400 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.96□□□□□ -1.62
FOXN3O00409 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.96□□□□□ -1.62
FOXN3O00409 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.96□□□□□ -1.62
FOXN3O00409 AC109446.2-201ENST00000567872 497 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 AC002400.1-201ENST00000569310 726 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.96□□□□□ -1.62
FOXN3O00409 AC005084.1-201ENST00000605160 304 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 SNORD91B-202ENST00000608459 222 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 AC004948.1-201ENST00000609858 672 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 AC005962.2-201ENST00000611427 652 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.96□□□□□ -1.62
FOXN3O00409 AC090116.1-201ENST00000615679 446 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 AC091931.1-201ENST00000623488 728 ntBASIC4.96□□□□□ -1.62
FOXN3O00409 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
FOXN3O00409 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
FOXN3O00409 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.96□□□□□ -1.62
FOXN3O00409 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
FOXN3O00409 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
FOXN3O00409 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.96□□□□□ -1.62
FOXN3O00409 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.62
FOXN3O00409 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
FOXN3O00409 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
FOXN3O00409 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
FOXN3O00409 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
FOXN3O00409 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
FOXN3O00409 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
FOXN3O00409 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.95□□□□□ -1.62
FOXN3O00409 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.95□□□□□ -1.62
FOXN3O00409 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.95□□□□□ -1.62
FOXN3O00409 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
FOXN3O00409 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.95□□□□□ -1.62
FOXN3O00409 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
FOXN3O00409 RNU6-216P-201ENST00000363282 104 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 Y_RNA.318-201ENST00000365131 97 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
FOXN3O00409 BX510359.2-201ENST00000417920 305 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 AL365203.2-201ENST00000423444 196 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 BX119904.4-201ENST00000424402 301 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.95□□□□□ -1.62
FOXN3O00409 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.95□□□□□ -1.62
FOXN3O00409 AC016831.4-201ENST00000438302 307 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 THAP5P1-201ENST00000439089 262 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 MTCYBP3-201ENST00000445588 1137 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.95□□□□□ -1.62
FOXN3O00409 NDUFS5P3-201ENST00000450668 321 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 SLC31A1P1-201ENST00000451221 567 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.95□□□□□ -1.62
FOXN3O00409 SCARNA10-201ENST00000459255 330 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.95□□□□□ -1.62
FOXN3O00409 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.95□□□□□ -1.62
FOXN3O00409 AC026412.2-201ENST00000512270 1075 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.95□□□□□ -1.62
FOXN3O00409 RNA5SP464-201ENST00000516251 108 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 MTCO1P49-201ENST00000523429 802 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.95□□□□□ -1.62
FOXN3O00409 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
FOXN3O00409 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
FOXN3O00409 AC008127.2-201ENST00000549925 1075 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.95□□□□□ -1.62
FOXN3O00409 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.95□□□□□ -1.62
FOXN3O00409 ISCA1P3-201ENST00000577104 373 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.95□□□□□ -1.62
FOXN3O00409 MIR4436B2-201ENST00000581415 91 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 MIR4436B1-201ENST00000583272 91 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 AC090616.2-202ENST00000584248 222 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 ELOCP28-201ENST00000590044 317 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 VN1R90P-201ENST00000595717 726 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 OR6R2P-201ENST00000609216 300 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 AC008083.4-201ENST00000615076 444 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 AC092650.2-201ENST00000619984 902 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 AC010928.1-201ENST00000592477 1447 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 AC007529.1-201ENST00000418574 2178 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.95□□□□□ -1.62
FOXN3O00409 AC117529.2-201ENST00000512159 2068 ntBASIC4.95□□□□□ -1.62
FOXN3O00409 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
FOXN3O00409 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
FOXN3O00409 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
FOXN3O00409 SDAD1P1-202ENST00000524156 2051 ntBASIC4.94□□□□□ -1.62
FOXN3O00409 AL590240.1-201ENST00000334118 313 ntBASIC4.94□□□□□ -1.62
FOXN3O00409 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
FOXN3O00409 RNA5SP151-201ENST00000365632 117 ntBASIC4.94□□□□□ -1.62
FOXN3O00409 Y_RNA.560-201ENST00000384689 102 ntBASIC4.94□□□□□ -1.62
FOXN3O00409 MIR195-201ENST00000385194 87 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms