Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC006511.1-201ENST00000470614 315 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 RN7SL502P-201ENST00000481857 290 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AC021382.1-201ENST00000483523 359 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AC090096.1-201ENST00000489168 390 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AC093767.1-201ENST00000504523 156 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 MINOS1P4-201ENST00000515470 318 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AC100784.1-201ENST00000522790 310 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AC011979.2-201ENST00000527568 352 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AC007342.5-201ENST00000571340 2142 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AL513327.3-201ENST00000602618 469 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 PSMA6P4-201ENST00000603247 718 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 SNRPGP17-201ENST00000603780 214 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AC106900.2-201ENST00000604994 317 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AC103710.3-201ENST00000608157 948 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 MIR6849-201ENST00000618543 69 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 AP001029.2-203ENST00000589795 4910 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 MFSD8-239ENST00000641590 2479 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 CASC19-246ENST00000641625 1606 ntBASIC5.19□□□□□ -1.58
SHISA3A0PJX4 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHISA3A0PJX4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 OR10R3P-201ENST00000361688 942 ntBASIC5.18□□□□□ -1.58
SHISA3A0PJX4 Y_RNA.144-201ENST00000363521 113 ntBASIC5.18□□□□□ -1.58
SHISA3A0PJX4 RNA5SP211-201ENST00000365516 117 ntBASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 RNA5SP91-201ENST00000390902 119 ntBASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AC099535.1-201ENST00000408928 371 ntBASIC5.18□□□□□ -1.58
SHISA3A0PJX4 Y_RNA.615-201ENST00000410769 117 ntBASIC5.18□□□□□ -1.58
SHISA3A0PJX4 RN7SKP205-201ENST00000410999 307 ntBASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AC009965.2-201ENST00000425328 970 ntBASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AL031736.2-201ENST00000426573 787 ntBASIC5.18□□□□□ -1.58
SHISA3A0PJX4 OR4K11P-201ENST00000431829 904 ntBASIC5.18□□□□□ -1.58
SHISA3A0PJX4 RPL34P6-201ENST00000432390 345 ntBASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 RPS12P17-201ENST00000438591 377 ntBASIC5.18□□□□□ -1.58
SHISA3A0PJX4 RPL7P52-201ENST00000449200 742 ntBASIC5.18□□□□□ -1.58
SHISA3A0PJX4 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 FGF7P3-201ENST00000454645 303 ntBASIC5.18□□□□□ -1.58
SHISA3A0PJX4 RPL5P22-201ENST00000480199 884 ntBASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AC068587.1-201ENST00000483613 781 ntBASIC5.18□□□□□ -1.58
SHISA3A0PJX4 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 Y_RNA.665-201ENST00000516177 98 ntBASIC5.18□□□□□ -1.58
SHISA3A0PJX4 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 EIF4A2P5-201ENST00000529914 499 ntBASIC5.18□□□□□ -1.58
SHISA3A0PJX4 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AC068993.1-201ENST00000546724 589 ntBASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AC019322.1-201ENST00000571869 389 ntBASIC5.18□□□□□ -1.58
SHISA3A0PJX4 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 MIR4504-201ENST00000577413 92 ntBASIC5.18□□□□□ -1.58
SHISA3A0PJX4 OR4K8P-201ENST00000578842 1048 ntBASIC5.18□□□□□ -1.58
SHISA3A0PJX4 RN7SL66P-201ENST00000582099 264 ntBASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AL159972.1-201ENST00000625150 448 ntBASIC5.18□□□□□ -1.58
SHISA3A0PJX4 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.18□□□□□ -1.58
SHISA3A0PJX4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms