Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 SNORD65C-201ENST00000390962 71 ntBASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 RPL7AP73-201ENST00000413490 353 ntBASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 MFSD13B-201ENST00000420133 1290 ntBASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 AL009174.1-201ENST00000426577 416 ntBASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 UBE2D3P3-201ENST00000426992 425 ntBASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 RPL36P19-201ENST00000430744 301 ntBASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 HMGB1P37-201ENST00000439613 609 ntBASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 AC006011.1-201ENST00000442758 349 ntBASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 RPS15AP1-201ENST00000457423 391 ntBASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 AC018638.3-201ENST00000461273 132 ntBASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 AC008379.1-201ENST00000463655 464 ntBASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 RPS4XP6-201ENST00000477670 797 ntBASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 AF213884.1-201ENST00000488102 463 ntBASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 RPL35P6-201ENST00000490024 372 ntBASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 RPS23P1-201ENST00000491662 432 ntBASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 RN7SL810P-201ENST00000493031 276 ntBASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 MTND1P6-201ENST00000523621 946 ntBASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 OR6C73P-201ENST00000546432 358 ntBASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 AL133457.1-201ENST00000564251 987 ntBASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 AC005776.1-201ENST00000603164 290 ntBASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 AC099778.2-201ENST00000610904 211 ntBASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 AL445363.3-201ENST00000623080 671 ntBASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 AC092326.2-201ENST00000624772 1561 ntBASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KCNIP3Q9Y2W7 AL592148.3-201ENST00000608771 2646 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AL645927.1-201ENST00000396783 406 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AP002784.2-201ENST00000397300 549 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AL355379.1-201ENST00000405542 640 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 HSPE1P8-201ENST00000406997 288 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 RN7SKP285-201ENST00000410137 318 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 RN7SKP182-201ENST00000410772 298 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AC008280.1-201ENST00000418851 412 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 RPS15AP6-201ENST00000420703 385 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 MOB1AP2-201ENST00000446060 614 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AC005002.1-201ENST00000447458 540 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AC098824.1-201ENST00000453565 980 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 RPS3AP53-201ENST00000454716 778 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 RN7SL98P-201ENST00000462271 300 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 RPS3AP41-201ENST00000462701 778 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AP002884.2-201ENST00000471647 395 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AC087879.1-201ENST00000474343 374 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AC092451.1-201ENST00000480211 153 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 RPL23AP44-201ENST00000482216 473 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 MTCO2P9-201ENST00000503214 694 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AC093824.1-201ENST00000508796 343 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 PRELID3BP4-201ENST00000515476 571 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 RNU6-416P-201ENST00000516265 103 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 RNA5SP519-201ENST00000516480 119 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 LECT2-205ENST00000522943 574 ntTSL 3 BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AC104115.2-201ENST00000523026 687 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 BRD9P1-201ENST00000529855 560 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AC011611.5-201ENST00000552477 578 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AC022655.2-201ENST00000577280 318 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 MIR4504-201ENST00000577413 92 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AC026741.1-201ENST00000605892 482 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms