Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 MED28P2-201ENST00000475771 317 ntBASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 RPL22P13-201ENST00000493291 347 ntBASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 AC231760.1-201ENST00000498002 260 ntBASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 KCTD9P6-201ENST00000522306 950 ntBASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 ARL6IP1P3-201ENST00000524544 560 ntBASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 APPL2-203ENST00000546731 684 ntTSL 2 BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 DCN-210ENST00000547568 823 ntTSL 3 BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 IGBP1P1-201ENST00000554337 1009 ntBASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 AC119403.2-201ENST00000590960 598 ntBASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 PRELID3BP8-201ENST00000604148 295 ntBASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 FAM27E4-201ENST00000605259 342 ntBASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 CDY11P-201ENST00000447168 1651 ntBASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 NLN-202ENST00000502464 8354 ntTSL 5 BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 NCOA4P2-201ENST00000340589 1813 ntBASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 SELENOWP1-201ENST00000322792 252 ntBASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 RNU6-223P-201ENST00000362830 107 ntBASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 RNU1-19P-201ENST00000363306 165 ntBASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 RNU6-697P-201ENST00000363348 107 ntBASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 TEX41-204ENST00000423031 491 ntTSL 4 BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 RPL7P57-201ENST00000423238 740 ntBASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 AL590399.2-201ENST00000427536 309 ntBASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 TXNP1-201ENST00000441872 371 ntBASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 SDC4P-201ENST00000453285 601 ntBASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 ACA64.4-201ENST00000459070 127 ntBASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 AC091564.1-201ENST00000464563 479 ntBASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 AC022336.1-201ENST00000475510 337 ntBASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 RPL23AP40-201ENST00000487630 390 ntBASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 RPS23P1-201ENST00000491662 432 ntBASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 AC023194.1-201ENST00000493084 308 ntBASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 RN7SL57P-201ENST00000493687 290 ntBASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 AC026784.1-201ENST00000507986 352 ntBASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 AC138866.2-201ENST00000508650 584 ntBASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 HMGB1P19-201ENST00000517578 577 ntBASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 HMGN2P36-201ENST00000529541 409 ntBASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 NPM1P42-201ENST00000560329 862 ntBASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 MIR3133-201ENST00000583157 78 ntBASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.53□□□□□ -1.2
PDZRN3Q9UPQ7 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
PDZRN3Q9UPQ7 AC119744.1-201ENST00000454746 1715 ntBASIC7.52□□□□□ -1.2
PDZRN3Q9UPQ7 AC116158.1-201ENST00000560231 2129 ntBASIC7.52□□□□□ -1.2
PDZRN3Q9UPQ7 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
PDZRN3Q9UPQ7 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PDZRN3Q9UPQ7 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
PDZRN3Q9UPQ7 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.52□□□□□ -1.21
PDZRN3Q9UPQ7 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC7.52□□□□□ -1.21
PDZRN3Q9UPQ7 RPL7P26-201ENST00000333817 754 ntBASIC7.52□□□□□ -1.21
PDZRN3Q9UPQ7 Y_RNA.5-201ENST00000362334 102 ntBASIC7.52□□□□□ -1.21
PDZRN3Q9UPQ7 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC7.52□□□□□ -1.21
PDZRN3Q9UPQ7 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PDZRN3Q9UPQ7 Y_RNA.396-201ENST00000383949 103 ntBASIC7.52□□□□□ -1.21
PDZRN3Q9UPQ7 RNU6-533P-201ENST00000384144 107 ntBASIC7.52□□□□□ -1.21
PDZRN3Q9UPQ7 RNU6-432P-201ENST00000384196 109 ntBASIC7.52□□□□□ -1.21
PDZRN3Q9UPQ7 RNU6-831P-201ENST00000384548 107 ntBASIC7.52□□□□□ -1.21
PDZRN3Q9UPQ7 U8.14-201ENST00000390843 143 ntBASIC7.52□□□□□ -1.21
PDZRN3Q9UPQ7 RPS4XP8-201ENST00000402039 771 ntBASIC7.52□□□□□ -1.21
PDZRN3Q9UPQ7 SPTLC1P2-201ENST00000407089 121 ntBASIC7.52□□□□□ -1.21
PDZRN3Q9UPQ7 Y_RNA.608-201ENST00000410647 95 ntBASIC7.52□□□□□ -1.21
PDZRN3Q9UPQ7 CEP57L1P1-201ENST00000430943 1201 ntBASIC7.52□□□□□ -1.21
PDZRN3Q9UPQ7 MRPS31P2-201ENST00000451581 518 ntBASIC7.52□□□□□ -1.21
PDZRN3Q9UPQ7 DNAJB5P1-201ENST00000454004 806 ntBASIC7.52□□□□□ -1.21
PDZRN3Q9UPQ7 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms